Gene
| Gene Model ID | pfu_aug2.0_1.1_03373 |
|---|---|
| Locus | scaffold1.1 : 1148562 ... 1164428 : + |
| To GenomeBrowser | scaffold1.1:1148562..1164428 |
| Genes list of scaffold | scaffold1.1 |
| Synonym | pfu_aug1.0_4640.1_16449 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1.1_03373.t1 | 2 | 1 | BTB | 20 | 121 | 1.3e-25 | 89.4 | 1.7e-26 | 6.4e-23 | 80.8 |
| pfu_aug2.0_1.1_03373.t1 | 2 | 1 | BACK | 96 | 122 | 1.2e-10 | 41.1 | 0.028 | 100.0 | 2.7 |
| pfu_aug2.0_1.1_03373.t1 | 2 | 2 | BTB | 123 | 153 | 1.3e-25 | 89.4 | 0.001 | 3.7 | 7.5 |
| pfu_aug2.0_1.1_03373.t1 | 2 | 2 | BACK | 128 | 235 | 1.2e-10 | 41.1 | 9.5e-13 | 3.5e-09 | 36.4 |
| pfu_aug2.0_1.1_03373.t1 | 1 | 1 | PHR | 315 | 461 | 2.1e-16 | 60.4 | 1.2e-19 | 4.3e-16 | 59.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1.1_03373.t1 | gi|390358628|ref|XP_003729302.1| | PREDICTED: BTB/POZ domain-containing protein 6-B [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_1.1_03373.t1 | gi|545202983|ref|XP_005605573.1| | PREDICTED: BTB/POZ domain-containing protein 6, partial [Equus caballus] | 0.0 |
| pfu_aug2.0_1.1_03373.t1 | gi|225543371|ref|NP_001139372.1| | BTB/POZ domain-containing protein 6 isoform 2 [Mus musculus] | 0.0 |
| pfu_aug2.0_1.1_03373.t1 | gi|564357541|ref|XP_006240726.1| | PREDICTED: BTB/POZ domain-containing protein 6 isoform X1 [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_1.1_03373.t1 | gi|731466562|ref|XP_010587179.1| | PREDICTED: BTB/POZ domain-containing protein 6 [Loxodonta africana] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1.1_03373.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03373.t1 atggaaaatgaatggcaaactggacgttcactggcagagtgtaataagtatatgctgacacatcaagtggcgtgtgatat cacattttgtataggcagtaactcggagcgagtacatgctcacaagtatgtgttggggagtcgcagctcggtgttctatg ccatgttgtatgggcccatggcgtctacaggggagatacatatcactgatattgaaatagaggcattccaatgttttcta agttacatctatgctgaggaggtgccactcacaggagaaaatgtcttagcggtcatgcacgcagcaaataaatacgccat gacagggttagaggcagaatgtgtagactttctaatggaaaacttgtctccagagaatgtatgtgccgtgctggaatgtg cccattgcttcagccgcaaagaactgaggaggcattgtatagaattcatcaaagataatccaggcgcgttcgattctgag cattttcaacatctatgtactgaatgtctttctatgattctaaaattagatgcgttgattattcaagaagaagatttata tgagtatgtgatgaagtggacagatgtccaatgtgcgtcacaaaacttggaggtaaatcaaactaatcgcaggcatgttt taggcaacttaatttacgatgtaagatttcctattatgaatcagaagttcttttcagaaatggttgtagctaaagagctt ttatcaacagaagaaactgttgacatcataaagcaaatgtcaggagaggaagtcagtnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnngagtgtcaattctcaaaactgaaaagacgcggaactcaacagtatgtatgtaaacgctttgcatatgaccga actgacatcaaatgggaaaggaaaacgggtaggatagatttctatgtagatattcatattttgatcaccggtcttatgct gtactctaaatactcaaatggaaacttgccccaggatacagaaagtatggaagtctacgctgctcttgaaaacagcgata gcgatgaggttctgacagaaatacggaaagtcataaaaatgcctagaaactcctgcatgttcaagataaattttccgagg tgtattaagctagagcctgacatcagatattcaatctacgtccagaaagaggacatgtatagtaattggggggacggtgg aatggcgagtgttgtatcggaaggcattaatttttacttcctcacgacatacaaatctgagcagacaaacagagccaaag gtctattacctggtatagtattctgtaagctaaggtga |
|
Protein
| Protein ID | pfu_aug2.0_1.1_03373.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1.1_03373.t1 MENEWQTGRSLAECNKYMLTHQVACDITFCIGSNSERVHAHKYVLGSRSSVFYAMLYGPMASTGEIHITDIEIEAFQCFL SYIYAEEVPLTGENVLAVMHAANKYAMTGLEAECVDFLMENLSPENVCAVLECAHCFSRKELRRHCIEFIKDNPGAFDSE HFQHLCTECLSMILKLDALIIQEEDLYEYVMKWTDVQCASQNLEVNQTNRRHVLGNLIYDVRFPIMNQKFFSEMVVAKEL LSTEETVDIIKQMSGEEVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXECQFSKLKRRGTQQYVCKRFAYDR TDIKWERKTGRIDFYVDIHILITGLMLYSKYSNGNLPQDTESMEVYAALENSDSDEVLTEIRKVIKMPRNSCMFKINFPR CIKLEPDIRYSIYVQKEDMYSNWGDGGMASVVSEGINFYFLTTYKSEQTNRAKGLLPGIVFCKLR |
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