Gene
| Gene Model ID | pfu_aug2.0_10.1_00003 |
|---|---|
| Locus | scaffold10.1 : 38424 ... 40615 : - |
| To GenomeBrowser | scaffold10.1:38424..40615 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug1.0_45915.1_70568 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00003.t1 | 1 | 1 | RVT_1 | 145 | 222 | 7.5e-08 | 31.9 | 1.7e-11 | 1.2e-07 | 31.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10.1_00003.t1 | gi|115678871|ref|XP_001199386.1| | 7.0e-27 | |
| pfu_aug2.0_10.1_00003.t1 | gi|115629293|ref|XP_798549.2| | 9.0e-27 | |
| pfu_aug2.0_10.1_00003.t1 | gi|390359050|ref|XP_788980.3| | 9.0e-24 | |
| pfu_aug2.0_10.1_00003.t1 | gi|449682351|ref|XP_002166620.2| | 5.0e-23 | |
| pfu_aug2.0_10.1_00003.t1 | gi|449665904|ref|XP_004206244.1| | 2.0e-22 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00003.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00003.t1 atgtacaaaaaggcacgtaatgaggcgagtttagcagttaaacgggcaaaatgggaatatgaaaagagtttggcaatgaa cataaagaaggatccgaaatcattttggaagaatgtaaaaagcaaaacaaaaattaaagagagcataccaaacttaaaat caaaaacaggagaaatagtagaggaaacagtacagaaaacaacagttttgaacgattactttgtttcggtgtttacaaaa gaagatgaaagcacgccagaatttgaggaaagaaattacaatacagtcctaacagacatagacatcaacagtgacgatcg acgttggaaaactcctgggaatgttgaaccccaagaagaaacaaagagtggtcctaaatgggaaatattcttcctggatg gatataacatccggaattccccaagggatccgagtgtactcggaccggttctctttttgatatatatcaatgacctacca gagactgtatcaaatgccataaaactattcgctgatgacactaaactctatgggccttcaaacaacacattcaatcaaag gagcatacaagaagacgttgacaaacttgaggaatggtcaaggacctggcagctaaatttcaacactgacaaatgtaagc acctccatctaggcaagttatactcgccagatgattacaaattgttagacaaagttatacagaaaacggagtgtgaaaag gatataggagttcatattgacagtcaactgaaattcaaaatacatgtatatcaacacagccgttaa |
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Protein
| Protein ID | pfu_aug2.0_10.1_00003.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00003.t1 MYKKARNEASLAVKRAKWEYEKSLAMNIKKDPKSFWKNVKSKTKIKESIPNLKSKTGEIVEETVQKTTVLNDYFVSVFTK EDESTPEFEERNYNTVLTDIDINSDDRRWKTPGNVEPQEETKSGPKWEIFFLDGYNIRNSPRDPSVLGPVLFLIYINDLP ETVSNAIKLFADDTKLYGPSNNTFNQRSIQEDVDKLEEWSRTWQLNFNTDKCKHLHLGKLYSPDDYKLLDKVIQKTECEK DIGVHIDSQLKFKIHVYQHSR |
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