Gene
| Gene Model ID | pfu_aug2.0_10.1_00006 |
|---|---|
| Locus | scaffold10.1 : 77126 ... 86938 : + |
| To GenomeBrowser | scaffold10.1:77126..86938 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug1.0_2233.1_58843 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium hydrogen exchanger 3- partial | GO:0005886 GO:0006814 GO:0015299 GO:0044425 GO:0098662 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00006.t1 | 1 | 1 | Na_H_Exchanger | 1 | 52 | 4.5e-09 | 35.3 | 7.2e-13 | 5.4e-09 | 35.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10.1_00006.t1 | gi|524888963|ref|XP_005101045.1| | PREDICTED: sodium/hydrogen exchanger 5-like isoform X5 [Aplysia californica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00006.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00006.t1 atggcgtacggaggattaaggggcggaatcgctttctgtctggcattgtcgttaaacgaggaacacgtaccagagaaaaa gctgtttgtcactgctacaattatcattgtattcttcacagtctttgttcagggtatttcaatcaaaccatgtgtgaatg ctctaaaagtcaaaaaagaagaggagaatgaaccaagtatgaatgagaagatacacgaatcttttatagatcacttaatg gccgggatggagggaatcaccaagagatcttcacacaacctgatgagaatcaaattccgggactttaaccacaagtactt acaacctttgtttggacgcgagaaaccaaaaaccaaagccaagaaggtgctagaggtatttcacacgatcagcgtggccg atgctctagatcagctcgataacccccaggttaatgtcagtcagaaggagtctctgtacaagccaagtgacagtatgaat gggtcatcatataatggtctagtcaatggtggatttgaagattctaatcaggctgcccggtttattgaccggcttgagcg tccagtgtacagactgactgatgacaatcaagatgtgcagacaggggaacagaaagttgtcagagaatggttaaggaggt caccaccagagggcggtggaaaacaggacggcaacgatcccgacaacaaaaaatccaaacttgttgacgctcccatggaa gaggaaaagaaatcacaatccaacggccacagtgatatcaaaatatcgtttctgaaaagagatgacgagtgtttggacgt cattgtctgtttacgctatggcgtcaacatgaaggataacattgtgacgtcacaagcggtctggtataaaaggctaggca cccggtataagatataccacgtcttcacgtga |
|
Protein
| Protein ID | pfu_aug2.0_10.1_00006.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00006.t1 MAYGGLRGGIAFCLALSLNEEHVPEKKLFVTATIIIVFFTVFVQGISIKPCVNALKVKKEEENEPSMNEKIHESFIDHLM AGMEGITKRSSHNLMRIKFRDFNHKYLQPLFGREKPKTKAKKVLEVFHTISVADALDQLDNPQVNVSQKESLYKPSDSMN GSSYNGLVNGGFEDSNQAARFIDRLERPVYRLTDDNQDVQTGEQKVVREWLRRSPPEGGGKQDGNDPDNKKSKLVDAPME EEKKSQSNGHSDIKISFLKRDDECLDVIVCLRYGVNMKDNIVTSQAVWYKRLGTRYKIYHVFT |
|