Gene
| Gene Model ID | pfu_aug2.0_10.1_00008 |
|---|---|
| Locus | scaffold10.1 : 97191 ... 106055 : - |
| To GenomeBrowser | scaffold10.1:97191..106055 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug1.0_2233.1_58845 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00008.t1 | 3 | 1 | DUF4476 | 1 | 62 | 2.3e-21 | 75.6 | 4.7e-07 | 0.0035 | 17.3 |
| pfu_aug2.0_10.1_00008.t1 | 3 | 2 | DUF4476 | 51 | 124 | 2.3e-21 | 75.6 | 9.2e-11 | 6.8e-07 | 29.2 |
| pfu_aug2.0_10.1_00008.t1 | 3 | 3 | DUF4476 | 137 | 212 | 2.3e-21 | 75.6 | 2.6e-11 | 2.0e-07 | 30.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10.1_00008.t1 | gi|676496910|ref|XP_009067369.1| | hypothetical protein LOTGIDRAFT_237224 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_10.1_00008.t1 | gi|524894048|ref|XP_005103531.1| | PREDICTED: uncharacterized protein LOC101855962 [Aplysia californica] | 0.0 |
| pfu_aug2.0_10.1_00008.t1 | gi|684390140|ref|XP_009169589.1| | hypothetical protein T265_06132 [Opisthorchis viverrini] | 1.0e-38 |
| pfu_aug2.0_10.1_00008.t1 | gi|260786546|ref|XP_002588318.1| | hypothetical protein BRAFLDRAFT_122889 [Branchiostoma floridae] | 1.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00008.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00008.t1 atggatgatgcaacctttaaacagcttctcgccaaaataaatcaggaaacaacctcctcagagaagaaggtggagattct atacagttctagaggatgttttgatgccagtcaggcttcctcattgttatatgcgtatggacgaccggctgacaagatcg cagtcctcaggatattagaacctagactgtgcaaaatgtcatgtagagaaggaagggacattataaatgctgtcagtgta cataatgataagcttattgctctggactccattaagagggtgctgacagataaccagaccaagttaggagaggagtacat actgagtgcattcccctttgagaatgataaacatcaagcattacagatcctccgcacagcttcctcattgttatatgcgt atggacggccggctgacaagatcgcagtcctcaggatattagaacctagactgtgcaaaatgtcatgtagagaaggaagg gacattataaatgctgtcagtgtacataatgataagcttattgctctggactccattaagagggtgctgacagataacca gaccaagttaggagaggagtacatactgagtgcattcccctttgagaatgataaacatcaagcattacagatcctccgca cagttggttcatacgttgcagagcatgtggctgctggaggtcaccaaggttacgcggcccttggtgggctgtacactcag gctagacccatggtaccacatctgtacggtccggtagaattccaagctactctcatccctggtcatggtaagatagagat ccccccagaagcccagccgggtgtggtcccctctgtatacacaggacacccctcatatgcttatcccgccgacaggagct acgacgaggatcgaggatacccagggaattcctcactgggacagaagatccccggcgattaccctactggagccccaccc ctgggattccatagtggtgcacccaacccaacaggattcctcaaactacagtcataa |
|
Protein
| Protein ID | pfu_aug2.0_10.1_00008.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00008.t1 MDDATFKQLLAKINQETTSSEKKVEILYSSRGCFDASQASSLLYAYGRPADKIAVLRILEPRLCKMSCREGRDIINAVSV HNDKLIALDSIKRVLTDNQTKLGEEYILSAFPFENDKHQALQILRTASSLLYAYGRPADKIAVLRILEPRLCKMSCREGR DIINAVSVHNDKLIALDSIKRVLTDNQTKLGEEYILSAFPFENDKHQALQILRTVGSYVAEHVAAGGHQGYAALGGLYTQ ARPMVPHLYGPVEFQATLIPGHGKIEIPPEAQPGVVPSVYTGHPSYAYPADRSYDEDRGYPGNSSLGQKIPGDYPTGAPP LGFHSGAPNPTGFLKLQS |
|