Gene
| Gene Model ID | pfu_aug2.0_10.1_00009 |
|---|---|
| Locus | scaffold10.1 : 106156 ... 128771 : + |
| To GenomeBrowser | scaffold10.1:106156..128771 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug1.0_2233.1_58846 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00009.t2 | 2 | 1 | CUB | 46 | 144 | 1.5e-16 | 60.3 | 1.1e-18 | 5.8e-16 | 58.5 |
| pfu_aug2.0_10.1_00009.t2 | 2 | 2 | CUB | 190 | 203 | 1.5e-16 | 60.3 | 4.3 | 2300.0 | -1.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10.1_00009.t2 | gi|260805338|ref|XP_002597544.1| | hypothetical protein BRAFLDRAFT_280452 [Branchiostoma floridae] | 2.0e-09 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00009.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00009.t1 atggaacagtttcctaaccaagcagccaaacatgtcaacttttacatctttgctgtaaccatctttctggctgtcagagc ctactcactgaccttttattgtgcccatggaaacaacgtaaatattcaaggggaggtaaatggtacaataaagacgctag tgaacggacagtcacattatggagataacatgaactgtacgtggacgttagatgccggagcggggaacagagttcgtctg aagaccttgacctttgacctccagtatacaccatcttatgtttcctgtaatggaaacgattatctacaaatacataatgg cgatactcagcaaagcgccatcttggggtccttctgcggcaggaacaatccttatgaagtcgtgagtcagggacgatacc tttattttaccttctggacaaatagtaaaaacttctacaaccatgctggcatcaccatggatttccaagtttttgctgat gatgcctgtcccccagagtggagtctattacactctgacaagacttgtgtcaagttgatgttaaaccctaacacaggtgc tgattggtcagattcccagaaatactgtggttacagccaatcaaatttagcaacttatgcaacacaaagtgtctttgatt ttgtgcaagcaaatctgtctcggtcaggaaccagtcacgcttgggtaggcttaaatgatgtgttaaaagaaggtgattac aagtggttgggtggatctacaccttcgtcttcaataagaacaaaaccctggccaccaaacaatgtgatagagatggctac cacttcttgtgccttcagaatcaatggaagtacggaagtgtataaaacccccgaagctcccacggagaccaccaaagttg aagtcgtctcgcttcgctggcagatcatactgggaattatgggaagtttgattgtcgtcatcgtgataaccataatctac tgttattgtagtcataaacggaaaaaagagagggttcaaaattcttccaggcaggataataccaataattctaaccaaag gacgcggacggagaatttctcagtgcggagtcagcagggtgaccgtagagccagggacactcgccctgcacctagtgcac ccccagcttacgaacctggaagtccgcctacctatgaagaatctctacaagatgacataaaggaagtctcccaccttcgt cactga |
|
| Transcript ID | pfu_aug2.0_10.1_00009.t2 |
| Definition | - |
>pfu_aug2.0_10.1_00009.t2 atggaacagtttcctaaccaagcagccaaacatgtcaacttttacatctttgctgtaaccatctttctggctgtcagagc ctactcactgaccttttattgtgcccatggaaacaacgtaaatattcaaggggaggtaaatggtacaataaagacgctag tgaacggacagtcacattatggagataacatgaactgtacgtggacgttagatgccggagcggggaacagagttcgtctg aagaccttgacctttgacctccagtatacaccatcttatgtttcctgtaatggaaacgattatctacaaatacataatgg cgatactcagcaaagcgccatcttggggtccttctgcggcaggaacaatccttatgaagtcgtgagtcagggacgatacc tttattttaccttctggacaaatagtaaaaacttctacaaccatgctggcatcaccatggatttccaagtttttgctgat gatgcctgtcccccagagtggagtctattacactctgacaagacttgtgtcaagttgatgttaaaccctaacacaggtgc tgattggtcagattcccagaaatactgtggttacagccaatcaaatttagcaacttatgcaacacaaagtgtctttgatt ttgtgcaagcaaatctgtctcggtcaggaaccagtcacgcttgggtaggcttaaatgatgtgttaaaagaagatggaagt acggaagtgtataaaacccccgaagctcccacggagaccaccaaatttgacaagaagagaacctcgttcacatggataat tattctcggagttttagccgtttgtctgataattctcatcataatattcttcatcgtgagaaggaggttaaaaaacagca gagagaatctagcccaatctacatgtaccactgaagaaataactcaactacaatcagccaatcaggagccaggatcgtcc gaatcgaccaatgagaatacaagtgcacaaccatcagctcctccccttgatgcccatgagcacccgcctacttatgaaga gacaatcaaacgtgacagcataaagctatctttcatatag |
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Protein
| Protein ID | pfu_aug2.0_10.1_00009.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00009.t1 MEQFPNQAAKHVNFYIFAVTIFLAVRAYSLTFYCAHGNNVNIQGEVNGTIKTLVNGQSHYGDNMNCTWTLDAGAGNRVRL KTLTFDLQYTPSYVSCNGNDYLQIHNGDTQQSAILGSFCGRNNPYEVVSQGRYLYFTFWTNSKNFYNHAGITMDFQVFAD DACPPEWSLLHSDKTCVKLMLNPNTGADWSDSQKYCGYSQSNLATYATQSVFDFVQANLSRSGTSHAWVGLNDVLKEGDY KWLGGSTPSSSIRTKPWPPNNVIEMATTSCAFRINGSTEVYKTPEAPTETTKVEVVSLRWQIILGIMGSLIVVIVITIIY CYCSHKRKKERVQNSSRQDNTNNSNQRTRTENFSVRSQQGDRRARDTRPAPSAPPAYEPGSPPTYEESLQDDIKEVSHLR H |
|
| Protein ID | pfu_aug2.0_10.1_00009.t2 |
| Definition | - |
>pfu_aug2.0_10.1_00009.t2 MEQFPNQAAKHVNFYIFAVTIFLAVRAYSLTFYCAHGNNVNIQGEVNGTIKTLVNGQSHYGDNMNCTWTLDAGAGNRVRL KTLTFDLQYTPSYVSCNGNDYLQIHNGDTQQSAILGSFCGRNNPYEVVSQGRYLYFTFWTNSKNFYNHAGITMDFQVFAD DACPPEWSLLHSDKTCVKLMLNPNTGADWSDSQKYCGYSQSNLATYATQSVFDFVQANLSRSGTSHAWVGLNDVLKEDGS TEVYKTPEAPTETTKFDKKRTSFTWIIILGVLAVCLIILIIIFFIVRRRLKNSRENLAQSTCTTEEITQLQSANQEPGSS ESTNENTSAQPSAPPLDAHEHPPTYEETIKRDSIKLSFI |
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