Gene
| Gene Model ID | pfu_aug2.0_10.1_00012 |
|---|---|
| Locus | scaffold10.1 : 161147 ... 199618 : - |
| To GenomeBrowser | scaffold10.1:161147..199618 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug1.0_2914.1_37444 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00012.t1 | 9 | 1 | MORN | 6 | 15 | 4.9e-28 | 95.1 | 0.56 | 8300.0 | -3.1 |
| pfu_aug2.0_10.1_00012.t1 | 9 | 2 | MORN | 16 | 36 | 4.9e-28 | 95.1 | 9.8e-09 | 0.00015 | 21.3 |
| pfu_aug2.0_10.1_00012.t1 | 9 | 3 | MORN | 40 | 60 | 4.9e-28 | 95.1 | 1.4e-05 | 0.21 | 11.3 |
| pfu_aug2.0_10.1_00012.t1 | 9 | 4 | MORN | 62 | 78 | 4.9e-28 | 95.1 | 9.5e-08 | 0.0014 | 18.2 |
| pfu_aug2.0_10.1_00012.t1 | 9 | 5 | MORN | 84 | 100 | 4.9e-28 | 95.1 | 0.00047 | 7.0 | 6.5 |
| pfu_aug2.0_10.1_00012.t1 | 9 | 6 | MORN | 108 | 129 | 4.9e-28 | 95.1 | 1.5e-08 | 0.00022 | 20.7 |
| pfu_aug2.0_10.1_00012.t1 | 9 | 7 | MORN | 139 | 156 | 4.9e-28 | 95.1 | 5.0e-09 | 7.5e-05 | 22.2 |
| pfu_aug2.0_10.1_00012.t1 | 9 | 8 | MORN | 304 | 324 | 4.9e-28 | 95.1 | 5.4e-08 | 0.0008 | 18.9 |
| pfu_aug2.0_10.1_00012.t1 | 9 | 9 | MORN | 327 | 349 | 4.9e-28 | 95.1 | 1.5e-08 | 0.00023 | 20.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10.1_00012.t1 | gi|524867488|ref|XP_005090555.1| | PREDICTED: junctophilin-1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_10.1_00012.t1 | gi|676493575|ref|XP_009066283.1| | hypothetical protein LOTGIDRAFT_91360, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_10.1_00012.t1 | gi|642924532|ref|XP_008194334.1| | PREDICTED: junctophilin-1 isoform X1 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_10.1_00012.t1 | gi|642924534|ref|XP_008194335.1| | PREDICTED: junctophilin-1 isoform X2 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_10.1_00012.t1 | gi|662191051|ref|XP_008468322.1| | PREDICTED: junctophilin-1 [Diaphorina citri] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00012.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00012.t1 atgagtgcaggcggagggagatttgattttgacgatggaggaacgtattgcggcggatgggaggacggcaaggcccatgg gcacggggtatgtacggggcccaaagggcaaggtgaatactcgggtgcttggcaatacggttttgaaatttctggagttt acacatggccgagtggtaattcttacaagggacagtggtttcagggaaaacgacacggattaggcgtagaaacgaaggga agatggatttataaaggagaatggacacaggggttcaaaggtcgttatggggtacgtcagagcctgacgtcaggggcccg gtacgagggcacgtggaccacggggctacaggacgggtacggatgtgaaacgtacgcagacggtgactcattgacaatcg acacagcaggtacttatcaaggacaatggttacgagggatgcgtcatggatatggcgtcagacaaagtgttccttacgga ctggcgtcacattaccggccaaaagccatacgtgcatctctgacgtcattaagaagtgaaaacgaggatgaacaggtggt caagaaccgggacagaaagctggacgaaagccggggagggttcgtccttaaggcgaaaagtgacgaaacccctcctacca ggcgacgctcaatattcgacaagcagggtcggtcaagcctcagaaaaacgctcatatctggcttgaaattgaaaaagcag aaaagtacaggagatattaatgactcgcccaagcgtcaaaccggatccgtacgtagcactataagtaatataagtcacgt gagtgcggattctacacaatccggaatgacaaatgcctctatgtatactgatagcaatcttagctttgtcagccaagatg acattacggacgttaacgtcacagaaacttactacggagaatggaagaacgacaaacgttcaggatttggagttagcgaa cgttctgacgggttgaagtatgaaggggaatggtttaacaataagaaatacggttatggagtgacgacatttaaagatgg cgccagggaagaggggaaatataaaaacaatgtcttaatatcatcaggaaagaaaaataaattatttttgattaggactt caaagttaagagaacgtgttgacaatgccgttttatctgcacagagaggagcacaaattgccttgcaaaaagccgacatt gccattaccagaatggccaatgcccgaggtaaggcagagcaagccgatcaggcggccatcaagtcggaacaggattccga tgttgcccgattaaaagccaaggaatacgcgcctgaatttcatcaaccgggaacagatattatgaaaaagaagatgcacg aattgagcgacgataatacgagcgaggattaccactatactgatgtaaaaacattacccaatcaccaccctcataaccgt tcaaaatccatgctagtacgtaaagcaaaccatatagaagaaggtcataacccgggaacaccgctgtttggcggcttgct acccatgaacgaggtttctccagacggaagtccggtcaagcatggaaacacagacctcaattatttaggagttggaggtt tgcagcctccacatgctgaagacaatatccctaatcattctccacacgacagaagtccgtcgttaaaaatacgacggtat agctttcttgccggatcaagaagagggcgtggcttcagtgaaatatttaactccgccattttgaacgaccattttgatca gtactctgctcaaatcgaggaaagtgtattaagtaaagaaatgattcgaggggaggaggctctcaagtctaatcatatag gggatccttctcccgactcgggtgtgtccgattctctagaacatgataatgaccgacccttggtcaggagacgtactatg ccaagcatagtcaaagatgacgacactgcaaaatcatccagcactgtagagactgcgcatagtagtgataatatagctaa caaaaatcctgaaacattcgttatagaaaacggcataaggaaaagaataaaaggggtagaaaagaaaatcaagccttcgg cctccaaaggcgaccttccaaacgagtttaaaatcgagagccaaaatagattagcaagagtaggtataagagggagtctt ccagatataacagtgatgaagaaaactgacaaaatcaaacccatgcctagggaggaggcttataaacttagctcagctag acgggaggagctgcggcgtctccaggagctagcagagcggcgtcgtcagggcgatgtcaccgttatactaggcgatctca aggattttgttcaacagcgccaattattagtttggtcagaggacactcgtgaaaacctgttcaatcccaagtttccaata ttatacaaagtggaatcggtacgagtttga |
|
Protein
| Protein ID | pfu_aug2.0_10.1_00012.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00012.t1 MSAGGGRFDFDDGGTYCGGWEDGKAHGHGVCTGPKGQGEYSGAWQYGFEISGVYTWPSGNSYKGQWFQGKRHGLGVETKG RWIYKGEWTQGFKGRYGVRQSLTSGARYEGTWTTGLQDGYGCETYADGDSLTIDTAGTYQGQWLRGMRHGYGVRQSVPYG LASHYRPKAIRASLTSLRSENEDEQVVKNRDRKLDESRGGFVLKAKSDETPPTRRRSIFDKQGRSSLRKTLISGLKLKKQ KSTGDINDSPKRQTGSVRSTISNISHVSADSTQSGMTNASMYTDSNLSFVSQDDITDVNVTETYYGEWKNDKRSGFGVSE RSDGLKYEGEWFNNKKYGYGVTTFKDGAREEGKYKNNVLISSGKKNKLFLIRTSKLRERVDNAVLSAQRGAQIALQKADI AITRMANARGKAEQADQAAIKSEQDSDVARLKAKEYAPEFHQPGTDIMKKKMHELSDDNTSEDYHYTDVKTLPNHHPHNR SKSMLVRKANHIEEGHNPGTPLFGGLLPMNEVSPDGSPVKHGNTDLNYLGVGGLQPPHAEDNIPNHSPHDRSPSLKIRRY SFLAGSRRGRGFSEIFNSAILNDHFDQYSAQIEESVLSKEMIRGEEALKSNHIGDPSPDSGVSDSLEHDNDRPLVRRRTM PSIVKDDDTAKSSSTVETAHSSDNIANKNPETFVIENGIRKRIKGVEKKIKPSASKGDLPNEFKIESQNRLARVGIRGSL PDITVMKKTDKIKPMPREEAYKLSSARREELRRLQELAERRRQGDVTVILGDLKDFVQQRQLLVWSEDTRENLFNPKFPI LYKVESVRV |
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