Gene
| Gene Model ID | pfu_aug2.0_10.1_00013 |
|---|---|
| Locus | scaffold10.1 : 202139 ... 273906 : + |
| To GenomeBrowser | scaffold10.1:202139..273906 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug1.0_83026.1_63890 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00013.t1 | 1 | 1 | Thiol-ester_cl | 470 | 500 | 7.9e-13 | 47.3 | 6.2e-16 | 1.8e-12 | 46.2 |
| pfu_aug2.0_10.1_00013.t1 | 1 | 1 | A2M_comp | 520 | 602 | 1.8e-25 | 89.6 | 1.0e-28 | 3.0e-25 | 88.9 |
| pfu_aug2.0_10.1_00013.t1 | 1 | 1 | A2M_recep | 697 | 780 | 6.1e-13 | 48.7 | 3.7e-16 | 1.1e-12 | 47.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10.1_00013.t1 | gi|706151288|ref|XP_010206924.1| | PREDICTED: CD109 antigen, partial [Colius striatus] | 0.0 |
| pfu_aug2.0_10.1_00013.t1 | gi|697019534|ref|XP_009571222.1| | PREDICTED: CD109 antigen, partial [Fulmarus glacialis] | 0.0 |
| pfu_aug2.0_10.1_00013.t1 | gi|704465419|ref|XP_010085491.1| | PREDICTED: CD109 antigen [Pterocles gutturalis] | 0.0 |
| pfu_aug2.0_10.1_00013.t1 | gi|699638426|ref|XP_009894069.1| | PREDICTED: CD109 antigen [Charadrius vociferus] | 0.0 |
| pfu_aug2.0_10.1_00013.t1 | gi|573875943|ref|XP_006626266.1| | PREDICTED: CD109 antigen-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00013.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00013.t1 atgcaggctataattttgttagctctttgtgggatagcggtcggtaatcctcactgtcgactaaacagcgactgtcccgc taactactgcgattatcccgactatccgttctgtgatcagagagaatgcaattgtcttagtccatgcaaaaaggattctg attgtgacgcagacaaaactatagactccacaggtcaccgctgttctcacagtccacgatactgtctgtcagggaagtgt cattgtgggtctgatcacctgacaacttctgatggaacatgcccacaaggtcacacagcagaatgtcacaacattgcctg tcagtctggttcccatctgtcatgtctaaatggagtctgtacatgcaccagtaatgccgtcagtggcggatgtatgacga gctcggactgccatagcttacaaggctgtccccctgtaaaccatcattgtgttgacagacaatgcaaatgtatctcgcca acaacgattcccaccaccacaaccaccacgacaactacgacacaagcaccgacaacaacagggactcctacattcccagg tttaacttggtttgctgtagctgacctgcactgtacaaatcatacatcttgtcaatcattttgtcgcagcggatattatg gcatatgtaaatcaggagaggaatgcaaatgcatgcacaattgctttcatgataccgattgtaactcggacagaacttac gatttaagaggacaccactgtagccatgacactcattactgtctcagaggtgtttgtcattgtgggcaagctacaaccgc catgatgaccacagctcagactactttagccactactacaggaaatggactcccaaaaacatcggtggtgaagaaacata taaggagcaacagtttagttttgattaaaagcttggtatacatgaagtgcttgaagtcctctattaagtttgtaccttta tactcaagtccttacgggttggatccagggcggggaaaaagattccagagggttatagtggaaatgaagaagggtcagtt cagctttgcagacatgcacgggaatctctttagtccttctccattaggagatagctggacgaagagggtttttgtgaaaa agggagctgtcactcctgtgttctttcccattgtgcctgacgtcatcggcaaaatcaagatcaacgtgaaggcgcgttca aaacatgcatctgatgcaataacgaaggaaatggacgtcaagcctgaaggaattgaaaagatgtattacatatctatcat taatgacctaaagaacgttaagaagcaaacaaggatcgtggacataacatttcctccaaaccttgtacgaggctcggaat acatcaagataactaacataggtgaccaaatgggatcaactatagccgggcttgaggatcttctgaggacgtcatatggc tgtggagagcagaatatgcttaactttgccccaaacgtattcgtcatcaattatctaaaaataacgctccaattaacgat ggacatagaacttcgcgccaaatcaattttacaagcaggttacctgagggaacttggataccagcactttgacggatctt tcagtgcatttggaaacagtgacagatttggaagcacttggctgacgagtttcgtgctgaagtgctttgtacaggctaag gatgcattgtttattgacaaaaaggtgattacagacgctgttttatggatcatcagacaacaaagactcgatggatcctt caatgagccagggaacgtgatacacaaagcaatgcaggacacggttctagcaattcaagctttctcagagtttgcagggc tggtcttttctcctacagtcaacattgcctctacagtgcagagcgcagggaaagaatatttcaagaaaacattcgttatt aacagtacaaacgccttgattctacagcaggcagaggtagcggtattctttaacgtagaggaggatttgttggaaccagc cttcttccttaatgtttctttgagtgacgagaatattaatgggttcaatatacgtatatgtttcagcttgcttcgtgaac aagtaattaccatggccctcctacaaattggcataccaacaggtatggagggggatgtagagtcactatccagaatccct gagataaaacgtgtagaggaggggtataggaaaatagatgtgtatctggaagagttaaccaagaaagtaaggtgtacatc aatggatgttaatcgagtggactggatagccagacacaaagcagtgcctgtggtattatttgactactatcaaccaacca atcaaatcacagagttttacgtctctaaagttctaagtaattcaaccataattgaagtatgccaaaacaatggttgtatg gaagtgaggaagtag |
|
Protein
| Protein ID | pfu_aug2.0_10.1_00013.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00013.t1 MQAIILLALCGIAVGNPHCRLNSDCPANYCDYPDYPFCDQRECNCLSPCKKDSDCDADKTIDSTGHRCSHSPRYCLSGKC HCGSDHLTTSDGTCPQGHTAECHNIACQSGSHLSCLNGVCTCTSNAVSGGCMTSSDCHSLQGCPPVNHHCVDRQCKCISP TTIPTTTTTTTTTTQAPTTTGTPTFPGLTWFAVADLHCTNHTSCQSFCRSGYYGICKSGEECKCMHNCFHDTDCNSDRTY DLRGHHCSHDTHYCLRGVCHCGQATTAMMTTAQTTLATTTGNGLPKTSVVKKHIRSNSLVLIKSLVYMKCLKSSIKFVPL YSSPYGLDPGRGKRFQRVIVEMKKGQFSFADMHGNLFSPSPLGDSWTKRVFVKKGAVTPVFFPIVPDVIGKIKINVKARS KHASDAITKEMDVKPEGIEKMYYISIINDLKNVKKQTRIVDITFPPNLVRGSEYIKITNIGDQMGSTIAGLEDLLRTSYG CGEQNMLNFAPNVFVINYLKITLQLTMDIELRAKSILQAGYLRELGYQHFDGSFSAFGNSDRFGSTWLTSFVLKCFVQAK DALFIDKKVITDAVLWIIRQQRLDGSFNEPGNVIHKAMQDTVLAIQAFSEFAGLVFSPTVNIASTVQSAGKEYFKKTFVI NSTNALILQQAEVAVFFNVEEDLLEPAFFLNVSLSDENINGFNIRICFSLLREQVITMALLQIGIPTGMEGDVESLSRIP EIKRVEEGYRKIDVYLEELTKKVRCTSMDVNRVDWIARHKAVPVVLFDYYQPTNQITEFYVSKVLSNSTIIEVCQNNGCM EVRK |
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