Gene
| Gene Model ID | pfu_aug2.0_10.1_00015 |
|---|---|
| Locus | scaffold10.1 : 274597 ... 286588 : - |
| To GenomeBrowser | scaffold10.1:274597..286588 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00015.t1 | 4 | 1 | IBR | 83 | 101 | 1.9e-12 | 46.8 | 5.0 | 15000.0 | -4.2 |
| pfu_aug2.0_10.1_00015.t1 | 4 | 2 | IBR | 110 | 123 | 1.9e-12 | 46.8 | 0.22 | 660.0 | 0.2 |
| pfu_aug2.0_10.1_00015.t1 | 4 | 3 | IBR | 141 | 201 | 1.9e-12 | 46.8 | 6.3e-16 | 1.9e-12 | 46.8 |
| pfu_aug2.0_10.1_00015.t1 | 4 | 4 | IBR | 249 | 264 | 1.9e-12 | 46.8 | 0.068 | 200.0 | 1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10.1_00015.t1 | gi|573888198|ref|XP_006631869.1| | PREDICTED: E3 ubiquitin-protein ligase RNF14-like isoform X2 [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_10.1_00015.t1 | gi|573888196|ref|XP_006631868.1| | PREDICTED: E3 ubiquitin-protein ligase RNF14-like isoform X1 [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_10.1_00015.t1 | gi|625212602|ref|XP_003508239.2| | PREDICTED: E3 ubiquitin-protein ligase RNF14 isoform X1 [Cricetulus griseus] | 0.0 |
| pfu_aug2.0_10.1_00015.t1 | gi|694671926|ref|XP_009489641.1| | PREDICTED: E3 ubiquitin-protein ligase RNF14 [Pelecanus crispus] | 0.0 |
| pfu_aug2.0_10.1_00015.t1 | gi|698408603|ref|XP_009708667.1| | PREDICTED: E3 ubiquitin-protein ligase RNF14 [Cariama cristata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00015.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00015.t1 atgtggagttcatttctacaggaggaatcctttgatttccttggcttacaaaacccgcttgttattacatcagcccatat cagtaaaaaggaatctgacgtagaccacagggcaatccaggacatagggtcatttgaccgcctcctacccgcaataaggg attatgacaaaaattgtaaacagcaggaatttgacaaaagtttgttcacctgcaaagtctgtttctgtgagaagtcaggt agccagtgtattatatttctggattgtagccatgtgtattgtaaggactgtatgagagattatttcacagtacagataca ggaggggaacgtaaaggctttgctctgtccagatgataaatgcgagtcccaagcacacccttgccaggtaaaggatttag taaccaatgaattattcaccaagtatgataagttgttactacagacgtccctggacaccatggtggacgtgatgtactgt ccccgaccatcctgtcagtacccggttcttatggagaaggatggtaacatgggtagctgccccgcctgtcattatgtgtt ctgcgtgctgtgtaagctttgctaccacggactgtcaccgtgtaaaattaaagccgagggattaaagaatctgagggatg agtacctgaaagctgatagtgccactaagcagtacttggagaggcgttatggtaaacaggctatacagctggctgtcgag gagagctactcaaacgaatggcttgccgagtactctaaatcctgccctggatgtggtgctcatatccaggttggaagtcc aaatttttaccatgatggcatttga |
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Protein
| Protein ID | pfu_aug2.0_10.1_00015.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00015.t1 MWSSFLQEESFDFLGLQNPLVITSAHISKKESDVDHRAIQDIGSFDRLLPAIRDYDKNCKQQEFDKSLFTCKVCFCEKSG SQCIIFLDCSHVYCKDCMRDYFTVQIQEGNVKALLCPDDKCESQAHPCQVKDLVTNELFTKYDKLLLQTSLDTMVDVMYC PRPSCQYPVLMEKDGNMGSCPACHYVFCVLCKLCYHGLSPCKIKAEGLKNLRDEYLKADSATKQYLERRYGKQAIQLAVE ESYSNEWLAEYSKSCPGCGAHIQVGSPNFYHDGI |
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