Gene
| Gene Model ID | pfu_aug2.0_10.1_00016 |
|---|---|
| Locus | scaffold10.1 : 291319 ... 301174 : + |
| To GenomeBrowser | scaffold10.1:291319..301174 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug1.0_34995.1_04913 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00016.t1 | 2 | 1 | UNC-50 | 42 | 106 | 0.0 | 165.5 | 4.1e-33 | 2.0e-29 | 102.4 |
| pfu_aug2.0_10.1_00016.t1 | 2 | 2 | UNC-50 | 106 | 179 | 0.0 | 165.5 | 2.1e-23 | 1.0e-19 | 70.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10.1_00016.t1 | gi|664746336|ref|XP_008530515.1| | PREDICTED: protein unc-50 homolog isoform X2 [Equus przewalskii] | 0.0 |
| pfu_aug2.0_10.1_00016.t1 | gi|676460161|ref|XP_009055533.1| | hypothetical protein LOTGIDRAFT_153387 [Lottia gigantea] | 1.99993e-41 |
| pfu_aug2.0_10.1_00016.t1 | gi|524901019|ref|XP_005106924.1| | PREDICTED: protein unc-50 homolog [Aplysia californica] | 3.0e-38 |
| pfu_aug2.0_10.1_00016.t1 | gi|327268088|ref|XP_003218830.1| | PREDICTED: protein unc-50 homolog [Anolis carolinensis] | 9.0e-38 |
| pfu_aug2.0_10.1_00016.t1 | gi|194220385|ref|XP_001493222.2| | PREDICTED: protein unc-50 homolog [Equus caballus] | 2.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00016.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00016.t1 atggcaagttacatgaacagttcaccgcccccttcccctacatctagtatatcatcgcccctacatcatcgtgatggaca tggaacagacagcaagagagaggccaggctgtcagcatcagcaaaaagacagaaatacttacgtcgtttgtttaagttca gacaaatggactttgaatatgcattctggcagatgatatatctctttgttgcacctcaaaaagtgtacaggaattttcag tacagaaaacatacaaaggaccaatgggctagagatgatccagctttccttgtccttttaagcttttggcttattgtaat aaatggtaattcatttattggaatgttctttgggaacacactgtggctgattgctctgatttactatgtttacatcacat ttcttggatacagtgctctgccgtacctgaaaaacacacggacatttttatttcccgtgatggcggtattactgatctat gtgttgtctctcgtatttcactggaacttcaccaaaggactgtgttatttttacgaatatagagttctgtga |
|
Protein
| Protein ID | pfu_aug2.0_10.1_00016.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00016.t1 MASYMNSSPPPSPTSSISSPLHHRDGHGTDSKREARLSASAKRQKYLRRLFKFRQMDFEYAFWQMIYLFVAPQKVYRNFQ YRKHTKDQWARDDPAFLVLLSFWLIVINGNSFIGMFFGNTLWLIALIYYVYITFLGYSALPYLKNTRTFLFPVMAVLLIY VLSLVFHWNFTKGLCYFYEYRVL |
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