Gene
| Gene Model ID | pfu_aug2.0_10.1_00019 |
|---|---|
| Locus | scaffold10.1 : 361212 ... 369123 : - |
| To GenomeBrowser | scaffold10.1:361212..369123 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug1.0_2810.1_66473 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| atp-binding cassette sub-family b member mitochondrial | GO:0005524 GO:0008152 GO:0016021 GO:0042626 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00019.t1 | 1 | 1 | ABC_membrane | 4 | 128 | 2.7e-12 | 46.6 | 5.7e-15 | 3.9e-12 | 46.1 |
| pfu_aug2.0_10.1_00019.t1 | 1 | 1 | ABC_tran | 191 | 340 | 2.6e-33 | 115.2 | 6.0e-36 | 4.1e-33 | 114.5 |
| pfu_aug2.0_10.1_00019.t1 | 2 | 1 | SMC_N | 203 | 219 | 1.8e-08 | 33.8 | 0.0024 | 1.6 | 7.9 |
| pfu_aug2.0_10.1_00019.t1 | 2 | 1 | AAA_21 | 205 | 269 | 2.2e-07 | 31.1 | 7.1e-07 | 0.00048 | 20.1 |
| pfu_aug2.0_10.1_00019.t1 | 2 | 2 | SMC_N | 268 | 380 | 1.8e-08 | 33.8 | 2.9e-08 | 2.0e-05 | 23.9 |
| pfu_aug2.0_10.1_00019.t1 | 2 | 2 | AAA_21 | 312 | 366 | 2.2e-07 | 31.1 | 0.0027 | 1.8 | 8.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10.1_00019.t1 | gi|524884432|ref|XP_005098836.1| | PREDICTED: ATP-binding cassette sub-family B member 6, mitochondrial-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_10.1_00019.t1 | gi|676496101|ref|XP_009067104.1| | hypothetical protein LOTGIDRAFT_135144 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_10.1_00019.t1 | gi|157117982|ref|XP_001658950.1| | AAEL008134-PA [Aedes aegypti] | 0.0 |
| pfu_aug2.0_10.1_00019.t1 | gi|345485389|ref|XP_003425259.1| | PREDICTED: ATP-binding cassette sub-family B member 6, mitochondrial [Nasonia vitripennis] | 0.0 |
| pfu_aug2.0_10.1_00019.t1 | gi|642925694|ref|XP_008194673.1| | PREDICTED: ATP-binding cassette sub-family B member 6, mitochondrial isoform X2 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00019.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00019.t1 atgggagcatatctcgcggttaccatttggattacggaatggcgaacaaaatttagacgggaccagaacaaaatggacaa tgaaaccaaccaaacagctgtcgattcacttttgaacttcgaaacagtgaagtattacggggcctcggaatgggaggtga atcgatatgatcaggccatcgtcagattccagactgcagaatggaaatccaatgcctctttaaacttactcagcgctctg caaaacttcttcatttccggcggtctattggccggatctttactctgtgcatacgcagtgacagccgacatacccggcgt caacctgacggtcggtgactacatcctctttggaacatatttggtgcagctttacggaccattaaactggctagggtcat actataggatgatacagcaggcttttattgacatggaaaacatgtttgaacttttagatgaaaaagcagagattgaggac aagcccggtgccttggatctcagattaccatctgggggagagatatgctttaaggacgtgtatttctcctatgaacctca acgtgaagttttacatggaatctcgtttaccgttccagcaggaaaaacttacgcattggtcggtccttccggaagcggaa aaagtaccataatacgactcttgttccgcttttacgacgtttccttaggatgcattactatagatggacaaaacatagca aatgtaaagcagaatagcttacgtcagaatatcggtgtggtaccccaggacacggttctattcaatgcggacattaagta caatatccggtacgggaatgtcaacagccctgacattgatgtggtcaatgctgcggaggctgccgatatacacgacagga tacaagagttcccggatgcttatgaaacagtggttggcgaacgtggcttgaagctgagcggtggtgagaaacaacgagta gctattgcaagaacaattctgaaaaatccagcaatatgcctattagatgaggccacatcagccctggatacgcgcacgga aagaatcatacaaacgtccctggatcagatctgccagaacagaacaaccctgatagttgctcacagactctccaccatta tacatgctgatcagatcctcgtgttcaaggacggacatatcatagagaaaggaacacacgacaatttattaatgctggga ggattttaccacgatatgtgggagcagcaacataaaccagttggagaaggttctttccatagctcatctacgtcatcaac tacgtcagcagaagactgcaatgaatga |
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Protein
| Protein ID | pfu_aug2.0_10.1_00019.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00019.t1 MGAYLAVTIWITEWRTKFRRDQNKMDNETNQTAVDSLLNFETVKYYGASEWEVNRYDQAIVRFQTAEWKSNASLNLLSAL QNFFISGGLLAGSLLCAYAVTADIPGVNLTVGDYILFGTYLVQLYGPLNWLGSYYRMIQQAFIDMENMFELLDEKAEIED KPGALDLRLPSGGEICFKDVYFSYEPQREVLHGISFTVPAGKTYALVGPSGSGKSTIIRLLFRFYDVSLGCITIDGQNIA NVKQNSLRQNIGVVPQDTVLFNADIKYNIRYGNVNSPDIDVVNAAEAADIHDRIQEFPDAYETVVGERGLKLSGGEKQRV AIARTILKNPAICLLDEATSALDTRTERIIQTSLDQICQNRTTLIVAHRLSTIIHADQILVFKDGHIIEKGTHDNLLMLG GFYHDMWEQQHKPVGEGSFHSSSTSSTTSAEDCNE |
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