Gene
| Gene Model ID | pfu_aug2.0_10.1_00021 |
|---|---|
| Locus | scaffold10.1 : 374394 ... 385226 : + |
| To GenomeBrowser | scaffold10.1:374394..385226 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug1.0_11560.1_24917 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| porphobilinogen deaminase | GO:0044237 GO:0071704 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00021.t3 | 1 | 1 | Porphobil_deam | 9 | 162 | 0.0 | 176.5 | 0.0 | 0.0 | 176.1 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00021.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00021.t1 atgcttccaacttacagaaagtctgatttggccctcctcttgggtgaggtagactgtgtggtcagctcccttaaagatgt ccccatcaaattacaccaaggattggtcatcggatgtgtatttaagcgtgaaagtccatacgatgtagttgttttacacc cgaaatataacagccaaagtttggaaagtctccccaatggcagtgtaatagggactagctctttacggaggtctgcacag ctgtcagggagatacactcatctgaaatttgaagcaataaaaggcagtctgaacgatcgattccgcaagcttgatgaaga tgacagttatgcaggcctgattctggccgaggcaggtcttgtccgtatgggatggcagcacaggatatctgagaggcttc cacgtgatatatgtatgtacgctttgtgtcaaggtgccatcggggtgaagtgtagagaacaagattctgaaatcatcaat atgttgcaaccaatcaacgataaagaagcagcacttcagtgtgttgctgagcgctcattcttcaaaaatgggaacctcag ttataaaatgccggtttctgtcttttccgagatatccagcgaagagattaagctctcctatggagcgtttagcactgtta gcgacaaatgcaaaatagaatccatcttccagaagtgtgacgccatggaaaactcatatacggttcttcaccatctgtga |
|
| Transcript ID | pfu_aug2.0_10.1_00021.t2 |
| Definition | - |
>pfu_aug2.0_10.1_00021.t2 atgcttccaacttacagaaagtctgatttggccctcctcttgggtgaggtagactgtgtggtcagctcccttaaagatgt ccccatcaaattacaccaaggattggtcatcggatgtgtatttaagcgtgaaagtccatacgatgtagttgttttacacc cgaaatataacagccaaagtttggaaagtctccccaatggcagtgtaatagggactagctctttacggaggtctgcacag ctgtcagggagatacactcatctgaaatttgaagcaataaaaggcagtctgaacgatcgattccgcaagcttgatgaaga tgacagttatgcaggcctgattctggccgaggcaggtcttgtccgtatgggatggcagcacaggatatctgagaggcttc cacgtgatatatgtatgtacgctttgtgtcaaggtgccatcggggtgaagtgtagagaacaagattctgaaatcatcaat atgttgcaaccaatcaacgataaagaagcagcacttcagtgtgttgctgagcgctcattcttcaaaaatgggaacctcag ttataaaatgccggtttctgtcttttccgagatatccagcgaagagattaagctctcctatggagcgtttagcactgtta gcgacaaatgcaaaatagaatccatcttccagaagtgtgacgccatggaaaactcatatacgtcctcctcgagtaagaat tcatctgataccaaagttggtattgttcctcctcgacatgccccgtattccatcctttgtgctgcagacaccgctggtca gaggcttgctacggtgttgaaagcggatcctaccacacagcaaatattgtctgaaacaagcgatggacagtaa |
|
| Transcript ID | pfu_aug2.0_10.1_00021.t3 |
| Definition | - |
>pfu_aug2.0_10.1_00021.t3 atgcttccaacttacagaaagtctgatttggccctcctcttgggtgaggtagactgtgtggtcagctcccttaaagatgt ccccatcaaattacaccaaggattggtcatcggatgtgtatttaagcgtgaaagtccatacgatgtagttgttttacacc cgaaatataacagccaaagtttggaaagtctccccaatggcagtgtaatagggactagctctttacggaggtctgcacag ctgtcagggagatacactcatctgaaatttgaagcaataaaaggcagtctgaacgatcgattccgcaagcttgatgaaga tgacagttatgcaggcctgattctggccgaggcaggtcttgtccgtatgggatggcagcacaggatatctgagaggcttc cacgtgatatatgtatgtacgctttgtgtcaaggtgccatcggggtgaagtgtagagaacaagattctgaaatcatcaat atgttgcaaccaatcaacgataaagaagcagcacttcagtgtgttgctgagcgctcattcttcaaaaatgggaatatgtt tcacttcgaaaaacgaaaaatgtatacttttatgaaataa |
|
Protein
| Protein ID | pfu_aug2.0_10.1_00021.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00021.t1 MLPTYRKSDLALLLGEVDCVVSSLKDVPIKLHQGLVIGCVFKRESPYDVVVLHPKYNSQSLESLPNGSVIGTSSLRRSAQ LSGRYTHLKFEAIKGSLNDRFRKLDEDDSYAGLILAEAGLVRMGWQHRISERLPRDICMYALCQGAIGVKCREQDSEIIN MLQPINDKEAALQCVAERSFFKNGNLSYKMPVSVFSEISSEEIKLSYGAFSTVSDKCKIESIFQKCDAMENSYTVLHHL |
|
| Protein ID | pfu_aug2.0_10.1_00021.t2 |
| Definition | - |
>pfu_aug2.0_10.1_00021.t2 MLPTYRKSDLALLLGEVDCVVSSLKDVPIKLHQGLVIGCVFKRESPYDVVVLHPKYNSQSLESLPNGSVIGTSSLRRSAQ LSGRYTHLKFEAIKGSLNDRFRKLDEDDSYAGLILAEAGLVRMGWQHRISERLPRDICMYALCQGAIGVKCREQDSEIIN MLQPINDKEAALQCVAERSFFKNGNLSYKMPVSVFSEISSEEIKLSYGAFSTVSDKCKIESIFQKCDAMENSYTSSSSKN SSDTKVGIVPPRHAPYSILCAADTAGQRLATVLKADPTTQQILSETSDGQ |
|
| Protein ID | pfu_aug2.0_10.1_00021.t3 |
| Definition | - |
>pfu_aug2.0_10.1_00021.t3 MLPTYRKSDLALLLGEVDCVVSSLKDVPIKLHQGLVIGCVFKRESPYDVVVLHPKYNSQSLESLPNGSVIGTSSLRRSAQ LSGRYTHLKFEAIKGSLNDRFRKLDEDDSYAGLILAEAGLVRMGWQHRISERLPRDICMYALCQGAIGVKCREQDSEIIN MLQPINDKEAALQCVAERSFFKNGNMFHFEKRKMYTFMK |
|