Gene
| Gene Model ID | pfu_aug2.0_10.1_00031 |
|---|---|
| Locus | scaffold10.1 : 609879 ... 620650 : + |
| To GenomeBrowser | scaffold10.1:609879..620650 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug1.0_2295.1_01048 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00031.t3 | 1 | 1 | UBA | 167 | 201 | 1.5e-07 | 31.0 | 3.8e-11 | 2.8e-07 | 30.1 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00031.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00031.t1 atgtcaggtatcgtgattcgtatcggatcggctgggttctacaatctaagggaatgtggtaaaggatggttaccagagga gatcaacaggggaagatgtgaatatgtaagtaaagtgttgaaggttcatatacttcacctgactctagattacccttttc aggtgctgaataccccacctggcactaagatcagcttgaagggaaccattggagtggagcacggcttcctaatgctgaac aacaagaacacttcctgtattggtggtagggtggataaactggccgagaactgggaacttaaaaagatgttgtctaagca gaccagagttacagtgggatctgagggaggtcccccaccatttgtaccattcggtcagcgagtaagagagaacaaacctc aaacaaacagaaaagaaaattttaaatcattggacactgggaaagagaagaaagaagaggatgcagagtttgaacagcag agaaaagctgttggttcagatgcagacattgccagaatagtagaaatgggattctccacatcagaggccggtgccgcact gcgacagaataacggagacgtcagacaggcaataaactccttgttgtcaggggatgtacagagaggcgcggacagaggag gggggagggacagagggggacctccaggtggaagagataggggtcagaggaacggcccaaatataagggaggagagaagg gagagaggtgggcggggcagacgtaatgatgaaaatgaagatgtagaggcacctgccacaaagccttcagggccagcaac tctgtttgacttcttagaaactaagatcaaaccctcctcagaaggtgggcggggcagacgtaatgatgaaaatgaagatg tagaggcacctgtcacaaaaccttcagggccagcaactctgtttgacttcttagaaactaagatcaaaccctcttcagaa ggtaaaggtgggcggggcagacgtaatgatgaaaatgaagatgtagaggcacctgccacaaagccttcagggccagcaac tctgtttgacttcttagaaactaagatcaaaccctcttcagaagattctggaaaatcatcacagaagcaaaagccattac aggattctagtgaatattctagtcaaaataactacagaaggaatgactataacagagagtatgacgataagccgtaccgg acacaaaataatcctactagatcctcaaaaagtgatagcggtagaacaaatagagagaatgatagaaacagtagaccata ctcaaatacagagggacaagggtcttggaagaaggactctgatcaaagacagaggaattataataacaatagtgatgtgt catctggtgatcgagatagaaacagaaatagtgcaaatactcaacgaggtcagaaatctagtaactatgacaggagcagt tcttacaatgatcgtagtgacaattttgatgcagaagttagaaaacagtcacagtatgacaacagaggtaaaggtcaaag gtcaaattacaaccagcatgaccaacgttcacagtctgcgagagacggttataggggcaatgaaaattataagagtaatg atagctacaggagaaatgatagttttaggaataatgattctgataggactaagaacttcaatagaaatgatcagttttca aaccaggatagaaattatcagcagcagtcacggccgaagtcctcccaagactcacgacagagcaactataatgacagagg gtatggttcgcaggcgaaaaacaggggaaataattctgaacagggtgactcgaattcattcaatagaaacaataatagtg ccaatagtaggtttaatccaagagcacaggattttgttcctgctggacagatgggcctccaaggatttgatccaacatgt ccccctcctccttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaccagccacctcccaccaaccagcagcagta ttcgtatggaggccccaatgtggaagagaggagacaaatgtatggctaaatactgggaggataataagttttatgaggcg ttagtagagggagttgtaccagacctgcccacatgtgttgttaggtttgtggactacggaaatgtagaggaagtcaacct tagtgatgttaaacctctacaaagaaacacgacatccaaagggaagcacaatgatagatcgtacagtaactatgacaacc aaactctacctcagcagccctatgcagctccggttgccatggatacgcagtctgctaagcagcagataaggtccatggaa tttcatcggaaaagatcggatcagccacctcgagacggacgtcctcaacggaactcacaacagctatatcaacccccagg tcaaagaccgcagtag |
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| Transcript ID | pfu_aug2.0_10.1_00031.t2 |
| Definition | - |
>pfu_aug2.0_10.1_00031.t2 atgttattaaaactggtacgtgggcggggcagacgtaatgatgaaaatgaagatgtagaggcacctgtcacaaaaccttc agggccagcaactctgtttgacttcttagaaactaagatcaaaccctcttcagaaggtaaaggtgggcggggcagacgta atgatgaaaatgaagatgtagaggcacctgccacaaagccttcagggccagcaactctgtttgacttcttagaaactaag atcaaaccctcttcagaagattctggaaaatcatcacagaagcaaaagccattacaggattctagtgaatattctagtca aaataactacagaaggaatgactataacagagagtatgacgataagccgtaccggacacaaaataatcctactagatcct caaaaagtgatagcggtagaacaaatagagagaatgatagaaacagtagaccatactcaaatacagagggacaagggtct tggaagaaggactctgatcaaagacagaggaattataataacaatagtgatgtgtcatctggtgatcgagatagaaacag aaatagtgcaaatactcaacgaggtcagaaatctagtaactatgacaggagcagttcttacaatgatcgtagtgacaatt ttgatgcagaagttagaaaacagtcacagtatgacaacagaggtaaaggtcaaaggtcaaattacaaccagcatgaccaa cgttcacagtctgcgagagacggttataggggcaatgaaaattataagagtaatgatagctacaggagaaatgatagttt taggaataatgattctgataggactaagaacttcaatagaaatgatcagttttcaaaccaggatagaaattatcagcagc agtcacggccgaagtcctcccaagactcacgacagagcaactataatgacagagggtatggttcgcaggcgaaaaacagg ggaaataattctgaacagggtgactcgaattcattcaatagaaacaataatagtgccaatagtaggtttaatccaagagc acaggattttgttcctgctggacagatgggcctccaaggatttgatccaacatgtccccctcctccttttnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnaaccagccacctcccaccaaccagcagcagtattcgtatggaggccccaatgtggaa gagaggagacaaatgtatggctaaatactgggaggataataagttttatgaggcgttagtagagggagttgtaccagacc tgcccacatgtgttgttaggtttgtggactacggaaatgtagaggaagtcaaccttagtgatgttaaacctctacaaaga aacacgacatccaaagggaagcacaatgatagatcgtacagtaactatgacaaccaaactctacctcagcagccctatgc agctccggttgccatggatacgcagtctgctaagcagcagataaggtccatggaatttcatcggaaaagatcggatcagc cacctcgagacggacgtcctcaacggaactcacaacagctatatcaacccccaggtcaaagaccgcagtag |
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| Transcript ID | pfu_aug2.0_10.1_00031.t3 |
| Definition | - |
>pfu_aug2.0_10.1_00031.t3 atgtcaggtatcgtgattcgtatcggatcggctgggttctacaatctaagggaatgtggtaaaggatggttaccagagga gatcaacaggggaagatgtgaatatgtaagtaaagtgttgaaggttcatatacttcacctgactctagattacccttttc aggtgctgaataccccacctggcactaagatcagcttgaagggaaccattggagtggagcacggcttcctaatgctgaac aacaagaacacttcctgtattggtggtagggtggataaactggccgagaactgggaacttaaaaagatgttgtctaagca gaccagagttacagtgggatctgagggaggtcccccaccatttgtaccattcggtcagcgagtaagagagaacaaacctc aaacaaacagaaaagaaaattttaaatcattggacactgggaaagagaagaaagaagaggatgcagagtttgaacagcag agaaaagctgttggttcagatgcagacattgccagaatagtagaaatgggattctccacatcagaggccggtgccgcact gcgacagaataacggagacgtcagacaggcaataaactccttgttgtcaggggatgtacagagaggcgcggacagaggag gggggagggacagagggggacctccaggtggaagagataggggtcagaggaacggcccaaatataagggaggagagaagg gagagaggtgggcggggcagacgtaatgatgaaaatgaagatgtagaggcacctgccacaaagccttcagggccagcaac tctgtttgacttcttagaaactaagatcaaaccctcctcagaaggtgggcggggcagacgtaatgatgaaaatgaagatg tagaggcacctgtcacaaaaccttcagggccagcaactctgtttgacttcttagaaactaagatcaaaccctcttcagaa ggtaaaggtgggcggggcagacgtaatgatgaaaatgaagatgtagaggcacctgccacaaagccttcagggccagcaac tctgtttgacttcttagaaactaagatcaaaccctcttcagaaggtaaagttttgttttatgatatgaaataa |
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Protein
| Protein ID | pfu_aug2.0_10.1_00031.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00031.t1 MSGIVIRIGSAGFYNLRECGKGWLPEEINRGRCEYVSKVLKVHILHLTLDYPFQVLNTPPGTKISLKGTIGVEHGFLMLN NKNTSCIGGRVDKLAENWELKKMLSKQTRVTVGSEGGPPPFVPFGQRVRENKPQTNRKENFKSLDTGKEKKEEDAEFEQQ RKAVGSDADIARIVEMGFSTSEAGAALRQNNGDVRQAINSLLSGDVQRGADRGGGRDRGGPPGGRDRGQRNGPNIREERR ERGGRGRRNDENEDVEAPATKPSGPATLFDFLETKIKPSSEGGRGRRNDENEDVEAPVTKPSGPATLFDFLETKIKPSSE GKGGRGRRNDENEDVEAPATKPSGPATLFDFLETKIKPSSEDSGKSSQKQKPLQDSSEYSSQNNYRRNDYNREYDDKPYR TQNNPTRSSKSDSGRTNRENDRNSRPYSNTEGQGSWKKDSDQRQRNYNNNSDVSSGDRDRNRNSANTQRGQKSSNYDRSS SYNDRSDNFDAEVRKQSQYDNRGKGQRSNYNQHDQRSQSARDGYRGNENYKSNDSYRRNDSFRNNDSDRTKNFNRNDQFS NQDRNYQQQSRPKSSQDSRQSNYNDRGYGSQAKNRGNNSEQGDSNSFNRNNNSANSRFNPRAQDFVPAGQMGLQGFDPTC PPPPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSHLPPTSSSIRMEAPMWKRGDKCMAKYWEDNKFYEA LVEGVVPDLPTCVVRFVDYGNVEEVNLSDVKPLQRNTTSKGKHNDRSYSNYDNQTLPQQPYAAPVAMDTQSAKQQIRSME FHRKRSDQPPRDGRPQRNSQQLYQPPGQRPQ |
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| Protein ID | pfu_aug2.0_10.1_00031.t2 |
| Definition | - |
>pfu_aug2.0_10.1_00031.t2 MLLKLVRGRGRRNDENEDVEAPVTKPSGPATLFDFLETKIKPSSEGKGGRGRRNDENEDVEAPATKPSGPATLFDFLETK IKPSSEDSGKSSQKQKPLQDSSEYSSQNNYRRNDYNREYDDKPYRTQNNPTRSSKSDSGRTNRENDRNSRPYSNTEGQGS WKKDSDQRQRNYNNNSDVSSGDRDRNRNSANTQRGQKSSNYDRSSSYNDRSDNFDAEVRKQSQYDNRGKGQRSNYNQHDQ RSQSARDGYRGNENYKSNDSYRRNDSFRNNDSDRTKNFNRNDQFSNQDRNYQQQSRPKSSQDSRQSNYNDRGYGSQAKNR GNNSEQGDSNSFNRNNNSANSRFNPRAQDFVPAGQMGLQGFDPTCPPPPFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXTSHLPPTSSSIRMEAPMWKRGDKCMAKYWEDNKFYEALVEGVVPDLPTCVVRFVDYGNVEEVNLSDVKPLQR NTTSKGKHNDRSYSNYDNQTLPQQPYAAPVAMDTQSAKQQIRSMEFHRKRSDQPPRDGRPQRNSQQLYQPPGQRPQ |
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| Protein ID | pfu_aug2.0_10.1_00031.t3 |
| Definition | - |
>pfu_aug2.0_10.1_00031.t3 MSGIVIRIGSAGFYNLRECGKGWLPEEINRGRCEYVSKVLKVHILHLTLDYPFQVLNTPPGTKISLKGTIGVEHGFLMLN NKNTSCIGGRVDKLAENWELKKMLSKQTRVTVGSEGGPPPFVPFGQRVRENKPQTNRKENFKSLDTGKEKKEEDAEFEQQ RKAVGSDADIARIVEMGFSTSEAGAALRQNNGDVRQAINSLLSGDVQRGADRGGGRDRGGPPGGRDRGQRNGPNIREERR ERGGRGRRNDENEDVEAPATKPSGPATLFDFLETKIKPSSEGGRGRRNDENEDVEAPVTKPSGPATLFDFLETKIKPSSE GKGGRGRRNDENEDVEAPATKPSGPATLFDFLETKIKPSSEGKVLFYDMK |
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