Gene
| Gene Model ID | pfu_aug2.0_10.1_00034 |
|---|---|
| Locus | scaffold10.1 : 701269 ... 720475 : - |
| To GenomeBrowser | scaffold10.1:701269..720475 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug1.0_7219.1_24175 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mitochondrial rho gtpase 1-a-like isoform x2 | GO:0000166 GO:0005741 GO:0007165 GO:0016021 GO:0016787 GO:0046872 GO:0065008 GO:1902582 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00034.t4 | 2 | 1 | Miro | 27 | 135 | 5.5e-24 | 84.9 | 1.6e-19 | 2.3e-16 | 60.3 |
| pfu_aug2.0_10.1_00034.t4 | 2 | 1 | Ras | 27 | 180 | 1.8e-21 | 76.2 | 2.2e-20 | 3.3e-17 | 62.3 |
| pfu_aug2.0_10.1_00034.t4 | 3 | 1 | EF-hand_7 | 198 | 222 | 6.1e-06 | 26.2 | 0.0041 | 6.1 | 7.0 |
| pfu_aug2.0_10.1_00034.t4 | 3 | 1 | EF-hand_6 | 203 | 223 | 4.4e-06 | 26.1 | 0.044 | 66.0 | 3.7 |
| pfu_aug2.0_10.1_00034.t4 | 2 | 1 | EF-hand_1 | 204 | 223 | 1.3e-07 | 30.3 | 0.0026 | 3.9 | 7.0 |
| pfu_aug2.0_10.1_00034.t4 | 2 | 1 | EF_assoc_2 | 284 | 339 | 5.0e-20 | 71.0 | 1.1e-19 | 1.6e-16 | 59.8 |
| pfu_aug2.0_10.1_00034.t4 | 3 | 2 | EF-hand_7 | 342 | 366 | 6.1e-06 | 26.2 | 8.7e-06 | 0.013 | 15.6 |
| pfu_aug2.0_10.1_00034.t4 | 2 | 2 | EF-hand_1 | 343 | 369 | 1.3e-07 | 30.3 | 9.9e-08 | 0.00015 | 20.8 |
| pfu_aug2.0_10.1_00034.t4 | 3 | 2 | EF-hand_6 | 343 | 368 | 4.4e-06 | 26.1 | 7.0e-07 | 0.001 | 18.7 |
| pfu_aug2.0_10.1_00034.t4 | 1 | 1 | EF_assoc_1 | 374 | 411 | 1.7e-06 | 27.2 | 2.3e-09 | 3.4e-06 | 26.2 |
| pfu_aug2.0_10.1_00034.t4 | 3 | 3 | EF-hand_7 | 383 | 397 | 6.1e-06 | 26.2 | 7.5 | 11000.0 | -3.4 |
| pfu_aug2.0_10.1_00034.t4 | 2 | 2 | EF_assoc_2 | 384 | 398 | 5.0e-20 | 71.0 | 0.47 | 700.0 | 0.0 |
| pfu_aug2.0_10.1_00034.t4 | 3 | 3 | EF-hand_6 | 385 | 397 | 4.4e-06 | 26.1 | 7.1 | 11000.0 | -3.1 |
| pfu_aug2.0_10.1_00034.t4 | 2 | 2 | Miro | 432 | 508 | 5.5e-24 | 84.9 | 1.1e-07 | 0.00016 | 22.1 |
| pfu_aug2.0_10.1_00034.t4 | 2 | 2 | Ras | 466 | 512 | 1.8e-21 | 76.2 | 8.8e-05 | 0.13 | 11.6 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00034.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00034.t1 atgtgcactgagggacgcagtgatcggaaaccaatgggtcctgggcaatttttatgcgtcagagatgcaggacgcagagc tggagttggaaaaacttccttgatactaacgcttgttagtgaagaatttcctgatgaggtgccggctaaagctgaggaga tcaccattccagccgatgttactccagaacatgtccccacccacattgtagattatagctcccaggagcaagatgaggag agtctacaagaagaaattaacaaggccaatgttgtgtgtattgtttattctgtggaggacgaggactccattgaaaaaat tacaacatactggttgccttacatcagagctcagctgggagaggatcataaaacccccgttatacttgtcgggaataagt ctgatctcttagatttcagcatagaagagacaatgaggcctattatgaatgatttctcagaggtggaaacatgtgttgag tgttcagcaagaaccttgaagaatatcagtgagatgttttactatgcacaaaaagcagtattacacccaacagctcctgt atataaccctgaagaaaaagaattaacacaccagtgtaaaaaggctcttacaagaatatttaagatttgtgatttagaca atgactccattttaaatgatgatgaagtacacttatttcagcggaaatgttttaatgctccccttcatcaacaagccctg gacgatgtcaagtctatagtcaaaaggaatataacggaaggagtcatagacaatggaatagctctcaaagaattattcca tagcaacactaatactaaactgcaattttttcccagttttagactgtctgcttcctttttcttcatacattatttattca gagggggacgtcatgagacaacatggacggtgttaagggcctttggttatgatgacaatctacaattaaccagagattac ttatctccaaagatacaggcagggcctggtagtaccacagaattatcaaatcagggactgcaattccttagaatgatctt ccagaagtacgatgaggacaatgacggttgtttatcgcctccggagttacagagtctgtttagtacgtgtcctgtgatgc cgtggggacctgatgttaacaatacgatcagtaccaatcctaatggatggatcacaatgcagggattcctggctcagttt gtgttgacaacctctctttcagagaccacattacttcaaggtcacttaaatagaaatttacgctacatagcaacactcat aaaggaacatttatcaagttttaccatcaatacagtacaagtttatggacaagaaaagtacttactgctacacgaggtgg atgttgcagtatgtgacatgttgaatcctacagagatgaactgtgatgtagcttgtctagtatatgatgttacaaatcct cgatcgtttgatttctgtgctagaatgtaccataaacatttcatggacaccagaataccgactcttattgtagcgtgcaa gacagagtacccctctgtacggcaagattacgaactcactcctttacagttctgtaataaattcaaattaccgcctcctc agagttttacctgcatggacaaagtcaacaaagaggtgtacatcaaactggcaacgatggcagcctacccgtatggcaac aatccttttcatgcaagggagttgatgatgcaggatgagaagatttacatcaaagttggcgtaggggtggccatgcttgc cagtcttagtttccttgtattcaagttgtaccgagcgttaagataa |
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| Transcript ID | pfu_aug2.0_10.1_00034.t2 |
| Definition | - |
>pfu_aug2.0_10.1_00034.t2 atgtgcactgagggacgcagtgatcggaaaccaatgggtcctgggcaatttttatgcgtcagagatgcaggacgcagagc tggagttggaaaaacttccttgatactaacgcttgttagtgaagaatttcctgatgaggtgccggctaaagctgaggaga tcaccattccagccgatgttactccagaacatgtccccacccacattgtagattatagctcccaggagcaagatgaggag agtctacaagaagaaattaacaaggccaatgttgtgtgtattgtttattctgtggaggacgaggactccattgaaaaaat tacaacatactggttgccttacatcagagctcagctgggagaggatcataaaacccccgttatacttgtcgggaataagt ctgatctcttagatttcagcatagaagagacaatgaggcctattatgaatgatttctcagaggtggaaacatgtgttgag tgttcagcaagaaccttgaagaatatcagtgagatgttttactatgcacaaaaagcagtattacacccaacagctcctgt atataaccctgaagaaaaagaattaacacaccagtgtaaaaaggctcttacaagaatatttaagatttgtgatttagaca atgactccattttaaatgatgatgaagtacacttatttcagcggaaatgttttaatgctccccttcatcaacaagccctg gacgatgtcaagtctatagtcaaaaggaatataacggaaggagtcatagacaatggaatagctctcaaagaattattcca tagcaacactaatactaaactgcaattttttcccagttttagactgtctgcttcctttttcttcatacattatttattca gagggggacgtcatgagacaacatggacggtgttaagggcctttggttatgatgacaatctacaattaaccagagattac ttatctccaaagatacaggcagggcctggtagtaccacagaattatcaaatcagggactgcaattccttagaatgatctt ccagaagtacgatgaggacaatgacggttgtttatcgcctccggagttacagagtctgtttagtacgtgtcctgtgatgc cgtggggacctgatgttaacaatacgatcagtaccaatcctaatggatggatcacaatgcagggattcctggctcagttt gtgttgacaacctctctttcagagaccacattacttcaaggtcacttaaatagaaatttacgctacatagcaacactcat aaaggaacatttatcaagttttaccatcaatacagtacaagtttatggacaagaaaagtacttactgctacacgaggtgg atgttgcagtatgtgacatgttgaatcctacagagatgaactgtgatgtagcttgtctagtatatgatgttacaaatcct cgatcgtttgatttctgtgctagaatgtaccataaacatttcatggacaccagaataccgactcttattgtagcgtgcaa gacagagtacccctctgtacggcaagattacgaactcactcctttacagttctgtaataaattcaaattaccgcctcctc agagttttacctgcatggacaaagtcaacaaagaggtgtacatcaaactggcaacgatggcagcctacccaaacctcaaa cgtttggtgcacatgctgttggttcagcaaaatcctctatggctccaagagaaattaagtcatgcaagggagttgatgat gcaggatgagaagatttacatcaaagttggcgtaggggtggccatgcttgccagtcttagtttccttgtattcaagttgt accgagcgttaagataa |
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| Transcript ID | pfu_aug2.0_10.1_00034.t3 |
| Definition | - |
>pfu_aug2.0_10.1_00034.t3 atgtgcactgagggacgcagtgatcggaaaccaatgggtcctgggcaatttttatgcgtcagagatgcaggacgcagagc tggagttggaaaaacttccttgatactaacgcttgttagtgaagaatttcctgatgaggtgccggctaaagctgaggaga tcaccattccagccgatgttactccagaacatgtccccacccacattgtagattatagctcccaggagcaagatgaggag agtctacaagaagaaattaacaaggccaatgttgtgtgtattgtttattctgtggaggacgaggactccattgaaaaaat tacaacatactggttgccttacatcagagctcagctgggagaggatcataaaacccccgttatacttgtcgggaataagt ctgatctcttagatttcagcatagaagagacaatgaggcctattatgaatgatttctcagaggtggaaacatgtgttgag tgttcagcaagaaccttgaagaatatcagtgagatgttttactatgcacaaaaagcagtattacacccaacagctcctgt atataaccctgaagaaaaagaattaacacaccagtgtaaaaaggctcttacaagaatatttaagatttgtgatttagaca atgactccattttaaatgatgatgaagtacacttatttcagcggaaatgttttaatgctccccttcatcaacaagccctg gacgatgtcaagtctatagtcaaaaggaatataacggaaggagtcatagacaatggaatagctctcaaagaattattcca tagcaacactaatactaaactgcaattttttcccagttttagactgtctgcttcctttttcttcatacattatttattca gagggggacgtcatgagacaacatggacggtgttaagggcctttggttatgatgacaatctacaattaaccagagattac ttatctccaaagatacaggcagggcctggtagtaccacagaattatcaaatcagggactgcaattccttagaatgatctt ccagaagtacgatgaggacaatgacggttgtttatcgcctccggagttacagagtctgtttagtacgtgtcctgtgatgc cgtggggacctgatgttaacaatacgatcagtaccaatcctaatggatggatcacaatgcagggattcctggctcagttt gtgttgacaacctctctttcagagaccacattacttcaaggtcacttaaatagaaatttacgctacatagcaacactcat aaaggaacatttatcaagttttaccatcaatacagtacaagtttatggacaagaaaagtacttactgctacacgaggtgg atgttgcagtatgtgacatgttgaatcctacagagatgaactgtgatgtagcttgtctagtatatgatgttacaaatcct cgatcgtttgatttctgtgctagaatgtaccataaacatttcatggacaccagaataccgactcttattgtagcgtgcaa gacagagtacccctctgtacggcaagattacgaactcactcctttacagttctgtaataaattcaaattaccgcctcctc agagttttacctgcatggacaaagtcaacaaagaggtgtacatcaaactggcaacgatggcagcctaccctcatgcaagg gagttgatgatgcaggatgagaagatttacatcaaagttggcgtaggggtggccatgcttgccagtcttagtttccttgt attcaagttgtaccgagcgttaagataa |
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| Transcript ID | pfu_aug2.0_10.1_00034.t4 |
| Definition | - |
>pfu_aug2.0_10.1_00034.t4 atgtgcactgagggacgcagtgatcggaaaccaatgggtcctgggcaatttttatgcgtcagagatgcaggacgcagagc tggagttggaaaaacttccttgatactaacgcttgttagtgaagaatttcctgatgaggtgccggctaaagctgaggaga tcaccattccagccgatgttactccagaacatgtccccacccacattgtagattatagctcccaggagcaagatgaggag agtctacaagaagaaattaacaaggccaatgttgtgtgtattgtttattctgtggaggacgaggactccattgaaaaaat tacaacatactggttgccttacatcagagctcagctgggagaggatcataaaacccccgttatacttgtcgggaataagt ctgatctcttagatttcagcatagaagagacaatgaggcctattatgaatgatttctcagaggtggaaacatgtgttgag tgttcagcaagaaccttgaagaatatcagtgagatgttttactatgcacaaaaagcagtattacacccaacagctcctgt atataaccctgaagaaaaagaattaacacaccagtgtaaaaaggctcttacaagaatatttaagatttgtgatttagaca atgactccattttaaatgatgatgaagtacacttatttcagcggaaatgttttaatgctccccttcatcaacaagccctg gacgatgtcaagtctatagtcaaaaggaatataacggaaggagtcatagacaatggaatagctctcaaagaattattcca tagcaacactaatactaaactgcaattttttcccagttttagactgtctgcttcctttttcttcatacattatttattca gagggggacgtcatgagacaacatggacggtgttaagggcctttggttatgatgacaatctacaattaaccagagattac ttatctccaaagatacaggcagggcctggtagtaccacagaattatcaaatcagggactgcaattccttagaatgatctt ccagaagtacgatgaggacaatgacggttgtttatcgcctccggagttacagagtctgtttagtacgtgtcctgtgatgc cgtggggacctgatgttaacaatacgatcagtaccaatcctaatggatggatcacaatgcagggattcctggctcagttt gtgttgacaacctctctttcagagaccacattacttcaaggtcacttaaatagaaatttacgctacatagcaacactcat aaaggaacatttatcaagttttaccatcaatacagtacaagtttatggacaagaaaagtacttactgctacacgaggtgg atgttgcagtatgtgacatgttgaatcctacagagatgaactgtgatgtagcttgtctagtatatgatgttacaaatcct cgatcgtttgatttctgtgctagaatgtaccataaacatttcatggacaccagaataccgactcttattgtagcgtgcaa gacagagtacccctctgtacggcaagattacgaactcactcctttacagttctgtaataaattcaaattaccgcctcctc agagttttacctgcatggacaaagtcaacaaagaggtgtacatcaaactggcaacgatggcagcctacccaaacctcaaa cgtttggtgcacatgctgttggttcagcaaaatcctctatggctccaagagaaattaaggtatggcaacaatccttttca tgcaagggagttgatgatgcaggatgagaagatttacatcaaagttggcgtaggggtggccatgcttgccagtcttagtt tccttgtattcaagttgtaccgagcgttaagataa |
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Protein
| Protein ID | pfu_aug2.0_10.1_00034.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00034.t1 MCTEGRSDRKPMGPGQFLCVRDAGRRAGVGKTSLILTLVSEEFPDEVPAKAEEITIPADVTPEHVPTHIVDYSSQEQDEE SLQEEINKANVVCIVYSVEDEDSIEKITTYWLPYIRAQLGEDHKTPVILVGNKSDLLDFSIEETMRPIMNDFSEVETCVE CSARTLKNISEMFYYAQKAVLHPTAPVYNPEEKELTHQCKKALTRIFKICDLDNDSILNDDEVHLFQRKCFNAPLHQQAL DDVKSIVKRNITEGVIDNGIALKELFHSNTNTKLQFFPSFRLSASFFFIHYLFRGGRHETTWTVLRAFGYDDNLQLTRDY LSPKIQAGPGSTTELSNQGLQFLRMIFQKYDEDNDGCLSPPELQSLFSTCPVMPWGPDVNNTISTNPNGWITMQGFLAQF VLTTSLSETTLLQGHLNRNLRYIATLIKEHLSSFTINTVQVYGQEKYLLLHEVDVAVCDMLNPTEMNCDVACLVYDVTNP RSFDFCARMYHKHFMDTRIPTLIVACKTEYPSVRQDYELTPLQFCNKFKLPPPQSFTCMDKVNKEVYIKLATMAAYPYGN NPFHARELMMQDEKIYIKVGVGVAMLASLSFLVFKLYRALR |
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| Protein ID | pfu_aug2.0_10.1_00034.t2 |
| Definition | - |
>pfu_aug2.0_10.1_00034.t2 MCTEGRSDRKPMGPGQFLCVRDAGRRAGVGKTSLILTLVSEEFPDEVPAKAEEITIPADVTPEHVPTHIVDYSSQEQDEE SLQEEINKANVVCIVYSVEDEDSIEKITTYWLPYIRAQLGEDHKTPVILVGNKSDLLDFSIEETMRPIMNDFSEVETCVE CSARTLKNISEMFYYAQKAVLHPTAPVYNPEEKELTHQCKKALTRIFKICDLDNDSILNDDEVHLFQRKCFNAPLHQQAL DDVKSIVKRNITEGVIDNGIALKELFHSNTNTKLQFFPSFRLSASFFFIHYLFRGGRHETTWTVLRAFGYDDNLQLTRDY LSPKIQAGPGSTTELSNQGLQFLRMIFQKYDEDNDGCLSPPELQSLFSTCPVMPWGPDVNNTISTNPNGWITMQGFLAQF VLTTSLSETTLLQGHLNRNLRYIATLIKEHLSSFTINTVQVYGQEKYLLLHEVDVAVCDMLNPTEMNCDVACLVYDVTNP RSFDFCARMYHKHFMDTRIPTLIVACKTEYPSVRQDYELTPLQFCNKFKLPPPQSFTCMDKVNKEVYIKLATMAAYPNLK RLVHMLLVQQNPLWLQEKLSHARELMMQDEKIYIKVGVGVAMLASLSFLVFKLYRALR |
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| Protein ID | pfu_aug2.0_10.1_00034.t3 |
| Definition | - |
>pfu_aug2.0_10.1_00034.t3 MCTEGRSDRKPMGPGQFLCVRDAGRRAGVGKTSLILTLVSEEFPDEVPAKAEEITIPADVTPEHVPTHIVDYSSQEQDEE SLQEEINKANVVCIVYSVEDEDSIEKITTYWLPYIRAQLGEDHKTPVILVGNKSDLLDFSIEETMRPIMNDFSEVETCVE CSARTLKNISEMFYYAQKAVLHPTAPVYNPEEKELTHQCKKALTRIFKICDLDNDSILNDDEVHLFQRKCFNAPLHQQAL DDVKSIVKRNITEGVIDNGIALKELFHSNTNTKLQFFPSFRLSASFFFIHYLFRGGRHETTWTVLRAFGYDDNLQLTRDY LSPKIQAGPGSTTELSNQGLQFLRMIFQKYDEDNDGCLSPPELQSLFSTCPVMPWGPDVNNTISTNPNGWITMQGFLAQF VLTTSLSETTLLQGHLNRNLRYIATLIKEHLSSFTINTVQVYGQEKYLLLHEVDVAVCDMLNPTEMNCDVACLVYDVTNP RSFDFCARMYHKHFMDTRIPTLIVACKTEYPSVRQDYELTPLQFCNKFKLPPPQSFTCMDKVNKEVYIKLATMAAYPHAR ELMMQDEKIYIKVGVGVAMLASLSFLVFKLYRALR |
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| Protein ID | pfu_aug2.0_10.1_00034.t4 |
| Definition | - |
>pfu_aug2.0_10.1_00034.t4 MCTEGRSDRKPMGPGQFLCVRDAGRRAGVGKTSLILTLVSEEFPDEVPAKAEEITIPADVTPEHVPTHIVDYSSQEQDEE SLQEEINKANVVCIVYSVEDEDSIEKITTYWLPYIRAQLGEDHKTPVILVGNKSDLLDFSIEETMRPIMNDFSEVETCVE CSARTLKNISEMFYYAQKAVLHPTAPVYNPEEKELTHQCKKALTRIFKICDLDNDSILNDDEVHLFQRKCFNAPLHQQAL DDVKSIVKRNITEGVIDNGIALKELFHSNTNTKLQFFPSFRLSASFFFIHYLFRGGRHETTWTVLRAFGYDDNLQLTRDY LSPKIQAGPGSTTELSNQGLQFLRMIFQKYDEDNDGCLSPPELQSLFSTCPVMPWGPDVNNTISTNPNGWITMQGFLAQF VLTTSLSETTLLQGHLNRNLRYIATLIKEHLSSFTINTVQVYGQEKYLLLHEVDVAVCDMLNPTEMNCDVACLVYDVTNP RSFDFCARMYHKHFMDTRIPTLIVACKTEYPSVRQDYELTPLQFCNKFKLPPPQSFTCMDKVNKEVYIKLATMAAYPNLK RLVHMLLVQQNPLWLQEKLRYGNNPFHARELMMQDEKIYIKVGVGVAMLASLSFLVFKLYRALR |
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