Gene
| Gene Model ID | pfu_aug2.0_10.1_00035 |
|---|---|
| Locus | scaffold10.1 : 725696 ... 737894 : + |
| To GenomeBrowser | scaffold10.1:725696..737894 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug1.0_4826.1_59610 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00035.t1 | 5 | 1 | WD40 | 25 | 52 | 2.7e-17 | 61.9 | 0.0061 | 30.0 | 4.6 |
| pfu_aug2.0_10.1_00035.t1 | 5 | 2 | WD40 | 71 | 103 | 2.7e-17 | 61.9 | 0.00058 | 2.9 | 7.9 |
| pfu_aug2.0_10.1_00035.t1 | 5 | 3 | WD40 | 114 | 140 | 2.7e-17 | 61.9 | 8.7e-06 | 0.043 | 13.7 |
| pfu_aug2.0_10.1_00035.t1 | 5 | 4 | WD40 | 171 | 198 | 2.7e-17 | 61.9 | 1.0e-10 | 5.0e-07 | 29.3 |
| pfu_aug2.0_10.1_00035.t1 | 5 | 5 | WD40 | 352 | 368 | 2.7e-17 | 61.9 | 2.3 | 12000.0 | -3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10.1_00035.t1 | gi|676474651|ref|XP_009060213.1| | hypothetical protein LOTGIDRAFT_229075 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_10.1_00035.t1 | gi|524891733|ref|XP_005102399.1| | PREDICTED: vegetative incompatibility protein HET-E-1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_10.1_00035.t1 | gi|390361379|ref|XP_003729915.1| | PREDICTED: guanine nucleotide-binding protein subunit beta-2-like 1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_10.1_00035.t1 | gi|260801002|ref|XP_002595385.1| | hypothetical protein BRAFLDRAFT_69215 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_10.1_00035.t1 | gi|632987101|ref|XP_007910604.1| | PREDICTED: guanine nucleotide-binding protein subunit beta-like protein, partial [Callorhinchus milii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00035.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00035.t1 atgggaaaagaatggccatccaagttttcaggactagaaatattcaaagaaatacactacgattcttctctggattccat atatgccttacagtattcgtttgacagcgaggtcctggcagtaggatttgctagtggagccatacatttgtacaactcaa gaactggagaaatggtatctgaacttaggaaaccacgatacggtggaatgcagatcatgtgcctgcggttccatcccaag gaacatcatatattactggccaccacatcagatggcaaaattttagcatgcaatacaaaggatgggaccttagatgaagt tgcttcagaaaagggaaatgagataaactgtcttgatttttcctgtgagggatttgagtttgccactggaggaaaagacc ttgctgtcaggatatacaatgcaaaaacatatcagctattacatacctttgaaggctatagtaagaaaagtgtatcgtct gacgacagagaacattgtcctgtatcacaaagaatatggtgtctaaagttccatcccgacaacccagatatatttatgac cggaggttgggataatcaaattaagatttgggatataaggagtgaagctgatcccgttaggaggtctataagtggaccac atatctgtggagatgccatagacgttcagtggtcagagaaaaagggatatgtggagatacnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnntgactggatcatggtgtgccaaagatggccttcaaatatggaagtactctgagc cagagaaaggggccaaatctgttcctttccaatcttccaagggagcatacttatacactgccaaattctgtgacaatgat gttgtaatggctggtggaagcgggactaatagtgtagaggccatcaattctgaaacaggagagttgattggtgaagtgaa gatgcaaaaaccaattcaagccctggacacatgccgaggaggtagactgtttgccgtgggaggtggagaatttaacttga ttctaggtggccttatcagttag |
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Protein
| Protein ID | pfu_aug2.0_10.1_00035.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00035.t1 MGKEWPSKFSGLEIFKEIHYDSSLDSIYALQYSFDSEVLAVGFASGAIHLYNSRTGEMVSELRKPRYGGMQIMCLRFHPK EHHILLATTSDGKILACNTKDGTLDEVASEKGNEINCLDFSCEGFEFATGGKDLAVRIYNAKTYQLLHTFEGYSKKSVSS DDREHCPVSQRIWCLKFHPDNPDIFMTGGWDNQIKIWDIRSEADPVRRSISGPHICGDAIDVQWSEKKGYVEIXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGSWCAKDGLQIWKYSEPEKGAKSVPFQSSKGAYLYTAKFCDND VVMAGGSGTNSVEAINSETGELIGEVKMQKPIQALDTCRGGRLFAVGGGEFNLILGGLIS |
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