Gene
| Gene Model ID | pfu_aug2.0_10.1_00036 |
|---|---|
| Locus | scaffold10.1 : 742876 ... 755310 : + |
| To GenomeBrowser | scaffold10.1:742876..755310 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug1.0_24902.1_04408 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tuberin- partial | GO:1902531 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00036.t1 | 2 | 1 | DUF3384 | 50 | 218 | 0.0 | 192.7 | 2.1e-25 | 1.5e-21 | 76.4 |
| pfu_aug2.0_10.1_00036.t1 | 2 | 2 | DUF3384 | 234 | 407 | 0.0 | 192.7 | 6.2e-37 | 4.6e-33 | 114.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10.1_00036.t1 | gi|260801581|ref|XP_002595674.1| | hypothetical protein BRAFLDRAFT_64808 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_10.1_00036.t1 | gi|676426635|ref|XP_009044686.1| | hypothetical protein LOTGIDRAFT_61259, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_10.1_00036.t1 | gi|390333168|ref|XP_003723653.1| | 0.0 | |
| pfu_aug2.0_10.1_00036.t1 | gi|524881346|ref|XP_005097325.1| | PREDICTED: tuberin-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_10.1_00036.t1 | gi|340728427|ref|XP_003402526.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00036.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00036.t1 atgtccaaagaggaaggtaattttaaatcaaaattacgtggattctttggacttaaggaaaagccggcccaaattaccta ccagcgacagcagacaaaggaaataactttcacccctgaagtattaaaggatatcagtgcagaaagtccggcaaacaaca gaattcgcaccattaaagaattatcagaggttgttctaaataagaagctagaagagaatgccattgaggcattatggagc agcattagggacctgatcgaggagaattcctccccggataatcggcaggtggcgcttcacttcctagaatgtttacttca aggtcagctatcatacctcggaataaaacgagcacatttcttccatgtcatcgaaagactaacgaaaacaacagatcagc aacacagattaaatctgttcaagatactcagcacagatggtaaaaacctagaggagtttgaggaggaggcggggccattc ttactacaatggatgccgtccatgatggtggatgacaaacaaagggacttcttcatcgttcttattaacgtcatcaaatt caatgctgcttatctggacgaggagatagtaacgggaattgtcaaaaacacctgtatcatatcaagtagaaacagatctg aagatgaaattaagggattatttcttttttatgcccccggaatcaaagattcgggggcatataagctgatgagaaaacta ttgggcacacatttaggtcatagtagtatatacaccatgtgctgtatattacaagacagatgtcaacaaatagaccagaa ccttctccgaggggcagtgttttttatcgggatggctctatggggatctaagaaagtcactacactgaaacatacctact catctgtcctaccatccattctccaagttctctcgacaaatagttttgttgtggcgtatgaggttgtattatctgtacag aggttggtcaagaagtatggtaaagacttacaacatgtagaatggactattatactggaaatccttgaaactttgttcaa aatgcttgagactggagtatcaaatacgccaccagatcccagaatgcaggtagagatacacgacatactaacagaaatag agaatctacacgctcacggccaattcacaggatgtgtctcacggttcttcaagatcatcgagatatgtgccaataaacgt ccggaaaactcacgtgtgtttatcgatgcttaa |
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Protein
| Protein ID | pfu_aug2.0_10.1_00036.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00036.t1 MSKEEGNFKSKLRGFFGLKEKPAQITYQRQQTKEITFTPEVLKDISAESPANNRIRTIKELSEVVLNKKLEENAIEALWS SIRDLIEENSSPDNRQVALHFLECLLQGQLSYLGIKRAHFFHVIERLTKTTDQQHRLNLFKILSTDGKNLEEFEEEAGPF LLQWMPSMMVDDKQRDFFIVLINVIKFNAAYLDEEIVTGIVKNTCIISSRNRSEDEIKGLFLFYAPGIKDSGAYKLMRKL LGTHLGHSSIYTMCCILQDRCQQIDQNLLRGAVFFIGMALWGSKKVTTLKHTYSSVLPSILQVLSTNSFVVAYEVVLSVQ RLVKKYGKDLQHVEWTIILEILETLFKMLETGVSNTPPDPRMQVEIHDILTEIENLHAHGQFTGCVSRFFKIIEICANKR PENSRVFIDA |
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