Gene
| Gene Model ID | pfu_aug2.0_10.1_00038 |
|---|---|
| Locus | scaffold10.1 : 758529 ... 784942 : + |
| To GenomeBrowser | scaffold10.1:758529..784942 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug1.0_4826.1_59611 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tuberin-like isoform x2 | GO:0005096 GO:0007166 GO:0032007 GO:0033596 GO:0043547 GO:0060575 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00038.t3 | 1 | 1 | Rap_GAP | 383 | 571 | 1.4013e-45 | 155.2 | 0.0 | 1.4013e-45 | 154.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10.1_00038.t3 | gi|585706681|ref|XP_002740570.2| | PREDICTED: tuberin-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_10.1_00038.t3 | gi|597734642|ref|XP_007229614.1| | PREDICTED: tuberin-like [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_10.1_00038.t3 | gi|260801583|ref|XP_002595675.1| | hypothetical protein BRAFLDRAFT_64809 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00038.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00038.t1 atgacagatggcgctgcattccagtggtctcagtcaactcaactctcctacactccatccttcagactcttcacttcatg tttggaaaacgacaaagattggcaagtgttagagtgtgtgttagtgaacctgcccctgcttctgcagaataaaactctga tcctgtcaactagaagagaattaatagacaacttatgtcaccaactctgtgctatggtgaatgatcgtcaattaggattt cctgagaagttaaccagcgtaccgcccggtagatttacacgctcggactttcacacgtttgtcttcccggtgctatcgtc aatggtgacatatcataaatatctggacagagccaaacagagagagcttataaagtgtcttgagtttggcctggtttcta agtgtgccaagatctgtacaaactcgttacgtatttgtacgttagaaatgcaggaggtcatgatgagatcgttaccctcc gttctgctccagttgtcaaaaatctccgccacagtttacatggccataccagtattagcatttttatctagtatagtaag gttaccgaaaatgtatgctaactttgttgaagatgagtacatgagtgtctttgctatagcgttgccatatacaaaccctt ttaaatttagtcattacactgtctccctagcttaccatgttattacgatatggtttataagatgtcgtatgcctttcagg aaaagtttcgtcaaattcatacaaaagggtatgagggcaaatgtgatacaacaatttgaggagaattcaatgttacaaag tcagaatcaggattccagtgacagggcgcggtctggtagttataatgaaggggctctcagaagtagaaggagaatgttgt ccggagtgaccagagttcaccaggatttccaccctcctgttgataataaagatttccagttccacatggagctgacagaa acatgctctgatgttatggctagatatgcatttggaaactttaatgcaattccaaacaggtcacctgtagcgaaattcct gctagaaggtgggcagtcccaaacatggttgcttggcaacaagatcgttaccataacaaccagtggtggagggggtaaca aggggactcaaggaggactgtgcgaaaagtgtatagcatattatcaaggtagcagtgaacagaatgaacaagccaaacaa acaccggtgtcaaactctggtagaagaagacatagatctgaaatagtattcccaagtcgtagttcaacatctgcagatct gggcctcaagcccggtatggaggaatccagtggaccgcgaacttccctgatgacttga |
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| Transcript ID | pfu_aug2.0_10.1_00038.t2 |
| Definition | - |
>pfu_aug2.0_10.1_00038.t2 atgacagatggcgctgcattccagtggtctcagtcaactcaactctcctacactccatccttcagactcttcacttcatg tttggaaaacgacaaagattggcaagtgttagagtgtgtgttagtgaacctgcccctgcttctgcagaataaaactctga tcctgtcaactagaagagaattaatagacaacttatgtcaccaactctgtgctatggtgaatgatcgtcaattaggattt cctgagaagttaaccagcgtaccgcccggtagatttacacgctcggactttcacacgtttgtcttcccggtgctatcgtc aatggtgacatatcataaatatctggacagagccaaacagagagagcttataaagtgtcttgagtttggcctggtttcta agtgtgccaagatctgtacaaactcgttacgtatttgtacgttagaaatgcaggaggtcatgatgagatcgttaccctcc gttctgctccagttgtcaaaaatctccgccacagtttacatggccataccagtattagcatttttatctagtatagtaag gttaccgaaaatgtatgctaactttgttgaagatgagtacatgagtgtctttgctatagcgttgccatatacaaaccctt ttaaatttagtcattacactgtctccctagcttaccatgttattacgatatggtttataagatgtcgtatgcctttcagg aaaagtttcgtcaaattcatacaaaagggtatgagggcaaatgtgatacaacaatttgaggagaattcaatgttacaaag tcagaatcaggattccagtgacagggcgcggtctggtagttataatgaaggggctctcagaagtagaaggagaatgttgt ccggagtgaccagagttcaccaggatttccaccctcctgttgataataaagatttccagttccacatggagctgacagaa acatgctctgatgttatggctagatatgcatttggaaactttaatgcaattccaaacaggtcacctgtagcgaaattcct gctagaaggtgggcagtcccaaacatggttgcttggcaacaagatcgttaccataacaaccagtggtggagggggtaaca aggggactcaaggaggactgtgcgaaaaatctgggcctcaagcccggtatggaggaatccagtggaccgcgaacttccct gatgacttgagtatcagaaaggaatcatcatctgaacaagacattggagtacagacagggtcgtcacttacggatcacac tcctaaaatgggcttagagacggaagctttggagtcttatttatatggtttgaagcagcagtcatcagatgggcgtatgt ttcagaaccacatgtgtaactgttggtgcacaggctgggcagaggtgtacatacgtgctcctagtggaaacacgtcctgg atgatgagaattgagaatgaagctgctcttacatcattaatggattcccaggtgccggacatcacgttactatttacctc cgttcagaagaagcaacacccagacctagacagcttgtcctcacgtatagatagtggtagcataggagaggaggagtatg aatcactgtatgatcaacacttcccatcagaccatagtcaagatggcagaggacttgcaggatctccacagaaacaaaga aaagaaatccataaggagaaaaatggtttagagatccccagacctgtcagctcagaactggacgaacatggtccaacttt gaagcgatacaattcgtctccgtcagtgataggcagcagctgtgatgatctagacgaacatgacatagacgtacgagatg ctttgtcggaaagtattgtcgtagaagtcaacaagcacgagtatatcgaggaagataggaaaagtggaatttcttctgtt gctagcgataaaatagacggcacctctcagtcacacgaagaacaaaataaaacgaaaaatattgaaattaaaccgaattt acagagtgttcaaaatcatctccttcaaaatatgagtccatcaccagcgaattcggaagcttcatctgcgtatgatgagg tatcagagttaccttccattagaaaggtcagaggtcatactgtttccgtggcacagccatctaaggacagcagactgagg gaggaggtatctggcttaaagtcaaaggttgtaggggtcaaggacgcaggaagaggaggggtgaaccctagctttgtttt tctgcagctgtataatggaggattattaagtaatggtagtgatgcaccattacttttaccacagtccgaggcgatcacca ggtcactttcagtgctggacagaatccatccatttgaaacacacaagataggggtcgtgtatgttggacccagacagacc aaggatgagaaagccattttatcaaaccgttatggctcagagagatttgccaaattcatgggtggactgggcagtttgat caggcttaccaggtgtgacccgtctaaagtttacgtcggtggtctggatacaacgagcggtagggacggagagtttgcca tagggtggcaggatgaatcaatgcacgtgattttccatgttgcaacactcatgccaaacagggattcagatcctaattgt aacgcaaaaaagttacacatcggcaatgattatgtcactatagtatataacgacagtggggaggattataggataggagt tattaagggtcagtttaactatgtgaacattgtcatcaagccattggactttgtgacaaacacagttactttacaagcca aggaagacattgctgacatccttggtcataaggataccaaggtaatctcagatgatagcctagcagctctcgtcagacag atagccgttaactgtgatttagcgtctttagttctacaacgacaacagacacaaccccaggatccctacgcttcaaactg gctggaacgactgaggaaaatacgcaacatacgcacaaaagtgaactcggaaataggaccggatcagggatctacggaga tgtcaaggtcacctagccacacccctaaccatacaaaactattggacttcacgcatctagtataa |
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| Transcript ID | pfu_aug2.0_10.1_00038.t3 |
| Definition | - |
>pfu_aug2.0_10.1_00038.t3 atgaagactgagcttttaagatataaaaactcgaaaaaagtaaaacctttagcacacagtttgaagcagcagtcatcaga tgggcgtatgtttcagaaccacatgtgtaactgttggtgcacaggctgggcagaggtgtacatacgtgctcctagtggaa acacgtcctggatgatgagaattgagaatgaagctgctcttacatcattaatggattcccaggtgccggacatcacgtta ctatttacctccgttcagaagaagcaacacccagacctagacagcttgtcctcacgtatagatagtggtagcataggaga ggaggagtatgaatcactgtatgatcaacacttcccatcagaccatagtcaagatggcagaggacttgcaggatctccac agaaacaaagaaaagaaatccataaggagaaaaatggtttagagatccccagacctgtcagctcagaactggacgaacat ggtccaactttgaagcgatacaattcgtctccgtcagtgataggcagcagctgtgatgatctagacgaacatgacataga cgtacgagatgctttgtcggaaagtattgtcgtagaagtcaacaagcacgagtatatcgaggaagataggaaaagtggaa tttcttctgttgctagcgataaaatagacggcacctctcagtcacacgaagaacaaaataaaacgaaaaatattgaaatt aaaccgaatttacagagtgttcaaaatcatctccttcaaaatatgagtccatcaccagcgaattcggaagcttcatctgc gtatgatgaggtatcagagttaccttccattagaaaggtcagaggtcatactgtttccgtggcacagccatctaaggaca gcagactgagggaggaggtatctggcttaaagtcaaaggttgtaggggtcaaggacgcaggaagaggaggggtgaaccct agctttgtttttctgcagctgtataatggaggattattaagtaatggtagtgatgcaccattacttttaccacagtccga ggcgatcaccaggtcactttcagtgctggacagaatccatccatttgaaacacacaagataggggtcgtgtatgttggac ccagacagaccaaggatgagaaagccattttatcaaaccgttatggctcagagagatttgccaaattcatgggtggactg ggcagtttgatcaggcttaccaggtgtgacccgtctaaagtttacgtcggtggtctggatacaacgagcggtagggacgg agagtttgccatagggtggcaggatgaatcaatgcacgtgattttccatgttgcaacactcatgccaaacagggattcag atcctaattgtaacgcaaaaaagttacacatcggcaatgattatgtcactatagtatataacgacagtggggaggattat aggataggagttattaagggtcagtttaactatgtgaacattgtcatcaagccattggactttgtgacaaacacagttac tttacaagccaaggaagacattgctgacatccttggtcataaggataccaaggtaatctcagatgatagcctagcagctc tcgtcagacagatagccgttaactgtgatttagcgtctttagttctacaacgacaacagacacaaccccaggatccctac gcttcaaactggctggaacgactgaggaaaatacgcaacatacgcacaaaagtgaactcggaaataggaccggatcaggg atctacggagatgtcaaggtcacctagccacacccctaaccatacaaaactattggacttcacgcatctagtataa |
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Protein
| Protein ID | pfu_aug2.0_10.1_00038.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00038.t1 MTDGAAFQWSQSTQLSYTPSFRLFTSCLENDKDWQVLECVLVNLPLLLQNKTLILSTRRELIDNLCHQLCAMVNDRQLGF PEKLTSVPPGRFTRSDFHTFVFPVLSSMVTYHKYLDRAKQRELIKCLEFGLVSKCAKICTNSLRICTLEMQEVMMRSLPS VLLQLSKISATVYMAIPVLAFLSSIVRLPKMYANFVEDEYMSVFAIALPYTNPFKFSHYTVSLAYHVITIWFIRCRMPFR KSFVKFIQKGMRANVIQQFEENSMLQSQNQDSSDRARSGSYNEGALRSRRRMLSGVTRVHQDFHPPVDNKDFQFHMELTE TCSDVMARYAFGNFNAIPNRSPVAKFLLEGGQSQTWLLGNKIVTITTSGGGGNKGTQGGLCEKCIAYYQGSSEQNEQAKQ TPVSNSGRRRHRSEIVFPSRSSTSADLGLKPGMEESSGPRTSLMT |
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| Protein ID | pfu_aug2.0_10.1_00038.t2 |
| Definition | - |
>pfu_aug2.0_10.1_00038.t2 MTDGAAFQWSQSTQLSYTPSFRLFTSCLENDKDWQVLECVLVNLPLLLQNKTLILSTRRELIDNLCHQLCAMVNDRQLGF PEKLTSVPPGRFTRSDFHTFVFPVLSSMVTYHKYLDRAKQRELIKCLEFGLVSKCAKICTNSLRICTLEMQEVMMRSLPS VLLQLSKISATVYMAIPVLAFLSSIVRLPKMYANFVEDEYMSVFAIALPYTNPFKFSHYTVSLAYHVITIWFIRCRMPFR KSFVKFIQKGMRANVIQQFEENSMLQSQNQDSSDRARSGSYNEGALRSRRRMLSGVTRVHQDFHPPVDNKDFQFHMELTE TCSDVMARYAFGNFNAIPNRSPVAKFLLEGGQSQTWLLGNKIVTITTSGGGGNKGTQGGLCEKSGPQARYGGIQWTANFP DDLSIRKESSSEQDIGVQTGSSLTDHTPKMGLETEALESYLYGLKQQSSDGRMFQNHMCNCWCTGWAEVYIRAPSGNTSW MMRIENEAALTSLMDSQVPDITLLFTSVQKKQHPDLDSLSSRIDSGSIGEEEYESLYDQHFPSDHSQDGRGLAGSPQKQR KEIHKEKNGLEIPRPVSSELDEHGPTLKRYNSSPSVIGSSCDDLDEHDIDVRDALSESIVVEVNKHEYIEEDRKSGISSV ASDKIDGTSQSHEEQNKTKNIEIKPNLQSVQNHLLQNMSPSPANSEASSAYDEVSELPSIRKVRGHTVSVAQPSKDSRLR EEVSGLKSKVVGVKDAGRGGVNPSFVFLQLYNGGLLSNGSDAPLLLPQSEAITRSLSVLDRIHPFETHKIGVVYVGPRQT KDEKAILSNRYGSERFAKFMGGLGSLIRLTRCDPSKVYVGGLDTTSGRDGEFAIGWQDESMHVIFHVATLMPNRDSDPNC NAKKLHIGNDYVTIVYNDSGEDYRIGVIKGQFNYVNIVIKPLDFVTNTVTLQAKEDIADILGHKDTKVISDDSLAALVRQ IAVNCDLASLVLQRQQTQPQDPYASNWLERLRKIRNIRTKVNSEIGPDQGSTEMSRSPSHTPNHTKLLDFTHLV |
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| Protein ID | pfu_aug2.0_10.1_00038.t3 |
| Definition | - |
>pfu_aug2.0_10.1_00038.t3 MKTELLRYKNSKKVKPLAHSLKQQSSDGRMFQNHMCNCWCTGWAEVYIRAPSGNTSWMMRIENEAALTSLMDSQVPDITL LFTSVQKKQHPDLDSLSSRIDSGSIGEEEYESLYDQHFPSDHSQDGRGLAGSPQKQRKEIHKEKNGLEIPRPVSSELDEH GPTLKRYNSSPSVIGSSCDDLDEHDIDVRDALSESIVVEVNKHEYIEEDRKSGISSVASDKIDGTSQSHEEQNKTKNIEI KPNLQSVQNHLLQNMSPSPANSEASSAYDEVSELPSIRKVRGHTVSVAQPSKDSRLREEVSGLKSKVVGVKDAGRGGVNP SFVFLQLYNGGLLSNGSDAPLLLPQSEAITRSLSVLDRIHPFETHKIGVVYVGPRQTKDEKAILSNRYGSERFAKFMGGL GSLIRLTRCDPSKVYVGGLDTTSGRDGEFAIGWQDESMHVIFHVATLMPNRDSDPNCNAKKLHIGNDYVTIVYNDSGEDY RIGVIKGQFNYVNIVIKPLDFVTNTVTLQAKEDIADILGHKDTKVISDDSLAALVRQIAVNCDLASLVLQRQQTQPQDPY ASNWLERLRKIRNIRTKVNSEIGPDQGSTEMSRSPSHTPNHTKLLDFTHLV |
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