Gene
| Gene Model ID | pfu_aug2.0_10.1_00041 |
|---|---|
| Locus | scaffold10.1 : 803568 ... 822115 : - |
| To GenomeBrowser | scaffold10.1:803568..822115 |
| Genes list of scaffold | scaffold10.1 |
| Synonym | pfu_aug1.0_6061.1_16826 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium calcium exchanger 3-like | GO:0016020 GO:0030001 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10.1_00041.t1 | 2 | 1 | Na_Ca_ex | 57 | 216 | 1.4013e-45 | 153.9 | 1.7e-27 | 6.4e-24 | 84.1 |
| pfu_aug2.0_10.1_00041.t1 | 3 | 1 | Calx-beta | 356 | 443 | 7.9e-39 | 131.6 | 1.1e-20 | 4.1e-17 | 61.9 |
| pfu_aug2.0_10.1_00041.t1 | 3 | 2 | Calx-beta | 464 | 561 | 7.9e-39 | 131.6 | 2.0e-22 | 7.2e-19 | 67.5 |
| pfu_aug2.0_10.1_00041.t1 | 2 | 2 | Na_Ca_ex | 668 | 822 | 1.4013e-45 | 153.9 | 6.6e-25 | 2.4e-21 | 75.7 |
| pfu_aug2.0_10.1_00041.t1 | 3 | 3 | Calx-beta | 755 | 769 | 7.9e-39 | 131.6 | 2.9 | 11000.0 | -3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10.1_00041.t1 | gi|585711198|ref|XP_006824699.1| | PREDICTED: sodium/calcium exchanger 3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_10.1_00041.t1 | gi|390366351|ref|XP_794875.3| | PREDICTED: sodium/calcium exchanger 3 isoform X6 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_10.1_00041.t1 | gi|390366353|ref|XP_003731023.1| | 0.0 | |
| pfu_aug2.0_10.1_00041.t1 | gi|195999284|ref|XP_002109510.1| | hypothetical protein TRIADDRAFT_53617 [Trichoplax adhaerens] | 0.0 |
| pfu_aug2.0_10.1_00041.t1 | gi|676490608|ref|XP_009065325.1| | hypothetical protein LOTGIDRAFT_92127, partial [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_10.1_00041.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00041.t1 atgagtaacaatacaacgtctacgaccctacctacaaccacgcccttcaatatcgaggactacgtgtgccgagaaaaggg gaaacttctgcccgtcatcaatgagtacacgtggtctcctggaacccgcgcttttttatatctgctcttcttactttgga gttttatgggcgtggctattatagccgatgtgtttatgtgtgctattgaaaggattacaagtaaaacagccaaagtacgt gtccccgaccctgacgctccggagggattcagaatcttacgagttaaagtttggaatgacaccgtggccaacctcagctt gttggctcttggtactagtgcaccagaaattttgctctctgttattgagattgtaggagctgggttcgaagccggagaac ttggacctggaacaattgttggatctgcttcttttaatcttttggtcataggagctatttgtatctactctatacctgat ggagaagtcagacagatcgcgaatctgaaagtgttcgccgtgacgacttttagttgtatttttgcgtatgtttggcttac cttagttttattggtgatcacgccgggatacgttacactatgggaggccattattacatttcttatgtttccagctctaa ttttcgtagcttacatggccgatcgagattgttgtatgaaaaaagtggaattagaagaaaatggcatggttgggatttct ctgaacgacaaggaggagaggcgaccagcattaaccaaacaagagtcgtctggcgagggaaccatcatgaaacttgctaa ggaactcggtcacgagtcgttcgaccaaggtctgccagaggaagaagccgcgaaaatagcagccgcgaaaatacaggagc accagcaccatgaccgattatggtaccgtataaatgctacacgtggtgtcagcggtgggaagaagcttattccaagggtt ctaaccaccttccaaaagctctatgacacagtgactttacccgaggaggaaagaaccgagaataaactgacggtgaaaaa ggatcataccgagggcggcaccaaggccgtggtagaattcactgccgcctcactctcggttctagaaaacgagcaaaagg tccgcgttggaatccgacgatatggaaaactggataaacctgtgaaagtcaaagtagagaccataaacggtacagccgta gcccccgaggactacatccatctagaggaggtgattgaattcgccgccaatgaacagctacgacagttatacatacagat tgtggatgataatgaatgggaaccagacgagttcttctttgtcaagctagccctgacacacgacgaggaaactaacgaga gcgtagtgctaggaccagtgtcaatttcacaaatcacaatcattaatgatgacgaacccggaaaacttgaattcgctaag ccaagtatcatcgccaaggaaagcggacgtcatgtgagaattcctgtaaaccgtatccatggtgccgatggtcacgtgtc tgtcaagtggagaaccaaggacatcactgctatcagtggtgtggattacgaaggaggagagggagagctgaagtttgacc atggcgaaactaccaaaaatatcgacattcatatccatgacactaataaagatgagagagatgaaagttttgaagtagag ttaggtgaaactgacggaggagcagagctagccaagatcaagaaaactattgtcaccatcgttaatgatgaagaatttaa cggactggtcagcaggatagtcaatcttaccaaagccaacttagacgccctacaactggaggactcgacatgggtcagtc agtttaagacagccatgaacgttaatggcggagatctggagacggccacttttgtggactacattttacatttttgcacg ttcttttggaagattctgtttgcctttgtgccaccacccaaatacctaggcggttggccagccttcattctatccctcgc tgtgattggtctaatgacggcgctcattggagatgcagctagcatattcggttgtttgattggtctaaaagactccatca ccgccatttctatcgttgccttgggaaccagtatgccggatacgttcgctagtaaaacagcggccgtgaacgagaagaca gcggatagctctattggtaacatcaacggaagtaactccgtcaatgtattcctcgggctgggtctgtcgtggcttatagc gactatttatcatctagtaaaaactggttcggattttgaagtgccagcaaagactcttgctttctctgttgttctctaca cggtggcagccattgtagcaatagtgcttttggttcttagaaggacattacccatatttggtaatgccgaactcggcgga cctaaagttcctaaaatattctgtagtatcatattcttctcactgtggctgttttatttattgatgtccattttaaaagc ttacgatatcattactgtgaatatttaa |
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Protein
| Protein ID | pfu_aug2.0_10.1_00041.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10.1_00041.t1 MSNNTTSTTLPTTTPFNIEDYVCREKGKLLPVINEYTWSPGTRAFLYLLFLLWSFMGVAIIADVFMCAIERITSKTAKVR VPDPDAPEGFRILRVKVWNDTVANLSLLALGTSAPEILLSVIEIVGAGFEAGELGPGTIVGSASFNLLVIGAICIYSIPD GEVRQIANLKVFAVTTFSCIFAYVWLTLVLLVITPGYVTLWEAIITFLMFPALIFVAYMADRDCCMKKVELEENGMVGIS LNDKEERRPALTKQESSGEGTIMKLAKELGHESFDQGLPEEEAAKIAAAKIQEHQHHDRLWYRINATRGVSGGKKLIPRV LTTFQKLYDTVTLPEEERTENKLTVKKDHTEGGTKAVVEFTAASLSVLENEQKVRVGIRRYGKLDKPVKVKVETINGTAV APEDYIHLEEVIEFAANEQLRQLYIQIVDDNEWEPDEFFFVKLALTHDEETNESVVLGPVSISQITIINDDEPGKLEFAK PSIIAKESGRHVRIPVNRIHGADGHVSVKWRTKDITAISGVDYEGGEGELKFDHGETTKNIDIHIHDTNKDERDESFEVE LGETDGGAELAKIKKTIVTIVNDEEFNGLVSRIVNLTKANLDALQLEDSTWVSQFKTAMNVNGGDLETATFVDYILHFCT FFWKILFAFVPPPKYLGGWPAFILSLAVIGLMTALIGDAASIFGCLIGLKDSITAISIVALGTSMPDTFASKTAAVNEKT ADSSIGNINGSNSVNVFLGLGLSWLIATIYHLVKTGSDFEVPAKTLAFSVVLYTVAAIVAIVLLVLRRTLPIFGNAELGG PKVPKIFCSIIFFSLWLFYLLMSILKAYDIITVNI |
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