Gene
| Gene Model ID | pfu_aug2.0_100.1_00228 |
|---|---|
| Locus | scaffold100.1 : 29137 ... 43665 : - |
| To GenomeBrowser | scaffold100.1:29137..43665 |
| Genes list of scaffold | scaffold100.1 |
| Synonym | pfu_aug1.0_9896.1_10025 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_100.1_00228.t1 | 1 | 1 | zf-MYND | 302 | 339 | 1.9e-09 | 37.2 | 5.1e-13 | 3.8e-09 | 36.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_100.1_00228.t1 | gi|585640217|ref|XP_006880324.1| | PREDICTED: ankyrin repeat and MYND domain-containing protein 2 [Elephantulus edwardii] | 0.0 |
| pfu_aug2.0_100.1_00228.t1 | gi|676492085|ref|XP_009065807.1| | hypothetical protein LOTGIDRAFT_222617 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_100.1_00228.t1 | gi|556982701|ref|XP_005997594.1| | PREDICTED: ankyrin repeat and MYND domain-containing protein 2 isoform X2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_100.1_00228.t1 | gi|395541012|ref|XP_003772442.1| | 0.0 | |
| pfu_aug2.0_100.1_00228.t1 | gi|291236351|ref|XP_002738103.1| | PREDICTED: ankyrin repeat and MYND domain-containing protein 2-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_100.1_00228.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_100.1_00228.t1 atgagtacacctgccatggagggagtgagaccggcagagcagaagctgctagattccatagttaaaggatcagttgagga gcttaaaagcttggtacaagacccagatgttcgtacagattttgtcgatgatctttccgcggtagagaagaaatctgtga actgctactggcacacggtgcagatgttaatgccgacactcatcagaataaatattcagctcttatgtttggcgctctgt cagggctttntacttctgaatgccggagcaaagagagacgtagaaaattcagtgggtaggaacgcagcacaaatggcagg atttgttggccagcaccagtgtgtttcagtaatcaacaatttcttcccaaaagaagaacttctttatttcacaaaaatcc acggtctagagaaggaaccaaagctgccaatggagttgttcccatctttactgaagcttgttaacactgcagcgttacat cctgtaaagctctccttttacctgcaagaacatgtcggtttattggaaggatacaaaaagatcgtcaaagttttagagat gttatgtgagaagggcatgaaggccaaggacactaacgacgtcattgcgatgaagacacattacctagcaaccctgatac gaaatgtcggcaaaatatatgcagagaaaaaggaagtagagacatggataaaatgtcttgtaaaggggagagaatcagac ggttttgcagaatatcaggagaagtttttacggcaagttttaagagaattcccatacgcagagtctgaattactacagca gatggtcagaagtctggcaaacgttcaaattggtgacagtccaacagcagtatgtacactaagtcagggtttaaatggtc agagattccaggaagatgattgttgtgatacgtgtggggaacctaaggcagccaagaagtgttcagcgtgtaaaatggtg aattattgtaacctcagatgtcaaaaactacactggagcacacacaaaaagttctgtaaaaaactagcagagcaatacaa gttacaagagatcagaagacagcaagaagaggaaaatcagaaagaacaggcagcaaaagaaaatatggaaaaggcagaac aaagtcaggaacaaaatgaaagcatacaaattggtatataa |
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Protein
| Protein ID | pfu_aug2.0_100.1_00228.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_100.1_00228.t1 MSTPAMEGVRPAEQKLLDSIVKGSVEELKSLVQDPDVRTDFVDDLSAVEKKSVNCYWHTVQMLMPTLIRINIQLLCLALC QGFXLLNAGAKRDVENSVGRNAAQMAGFVGQHQCVSVINNFFPKEELLYFTKIHGLEKEPKLPMELFPSLLKLVNTAALH PVKLSFYLQEHVGLLEGYKKIVKVLEMLCEKGMKAKDTNDVIAMKTHYLATLIRNVGKIYAEKKEVETWIKCLVKGRESD GFAEYQEKFLRQVLREFPYAESELLQQMVRSLANVQIGDSPTAVCTLSQGLNGQRFQEDDCCDTCGEPKAAKKCSACKMV NYCNLRCQKLHWSTHKKFCKKLAEQYKLQEIRRQQEEENQKEQAAKENMEKAEQSQEQNESIQIGI |
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