Gene
| Gene Model ID | pfu_aug2.0_100.1_00231 |
|---|---|
| Locus | scaffold100.1 : 80487 ... 90065 : - |
| To GenomeBrowser | scaffold100.1:80487..90065 |
| Genes list of scaffold | scaffold100.1 |
| Synonym | pfu_aug1.0_14996.1_54133 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cyclin- partial | GO:0005634 GO:0031323 GO:0044260 GO:0051726 GO:0060255 GO:0080090 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_100.1_00231.t1 | 2 | 1 | Cyclin_N | 112 | 237 | 0.0 | 167.0 | 0.0 | 0.0 | 167.0 |
| pfu_aug2.0_100.1_00231.t1 | 2 | 1 | Cyclin_C | 187 | 227 | 2.8e-15 | 56.2 | 0.15 | 1100.0 | -0.5 |
| pfu_aug2.0_100.1_00231.t1 | 2 | 2 | Cyclin_C | 240 | 304 | 2.8e-15 | 56.2 | 2.1e-18 | 1.6e-14 | 53.8 |
| pfu_aug2.0_100.1_00231.t1 | 2 | 2 | Cyclin_N | 256 | 290 | 0.0 | 167.0 | 0.54 | 4000.0 | -2.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_100.1_00231.t1 | gi|676435260|ref|XP_009047499.1| | hypothetical protein LOTGIDRAFT_225111 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_100.1_00231.t1 | gi|260806975|ref|XP_002598359.1| | hypothetical protein BRAFLDRAFT_69715 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_100.1_00231.t1 | gi|632979418|ref|XP_007906458.1| | PREDICTED: cyclin-A2, partial [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_100.1_00231.t1 | gi|459173629|ref|XP_002125998.2| | PREDICTED: cyclin-A2 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_100.1_00231.t1 | gi|585687544|ref|XP_006820511.1| | PREDICTED: G2/mitotic-specific cyclin-A-like isoform X3 [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_100.1_00231.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_100.1_00231.t1 atgaacgttacggcgggacaaggcaatgatgaaaatggaattacaaagggaaaagtatttggacaagaaaatcaaccttt cacaatctttgtggatgaaaatgtggctgcccaagaaccatcaaaaccagtgtcaaaaccattacagagtcacaatgtgc taacatctatcagttctctcaacagtagactggctccacttagcactgcaccaatctgcatagatgacagtatagaatcc cctatggtgcttgacacatcagtggaggaagtagaagaaaaggaacccctctccagggaggctatcatcacaactgtacc agaatatgctcgagaaatttatgccaacctacgggaagaggagctgaagaacagagccaagtctacatacatgaagaagc agcaagacataacaacatcgatgcgtagtatcttgatagactggttggttgaggtatcagaggaatataaactccacagg gaaacattgttcttgactgttaattacatagacagattcctatcccagatggctgtacagagaggaaaactacagcttgt tggagccgctagcatgttcttagcagcgaaatatgaggagatttaccctccagatgtcggggagtttgcctacataacag atgatacctacaccaagaaacaagtattacgcatggagagtctgatactgaaggttctatcctttgatgttgctgtacca acagccaattggttctgtgatacattccttaagaactgtgaagctgatgagaaaaccagggcacttgctatgttcctgct ggagtcaacactgattgattcagagacctacctcaagtatttacccagtgttgtggctgctgcatcaacttgcctagcca gatgtgccatgggacttgaaccatgggagaaacttaaaatactgaacctcaaatggaatgcattccaattctttacacag agtagcatcatagaaaataagagatttcagctgaattga |
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Protein
| Protein ID | pfu_aug2.0_100.1_00231.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_100.1_00231.t1 MNVTAGQGNDENGITKGKVFGQENQPFTIFVDENVAAQEPSKPVSKPLQSHNVLTSISSLNSRLAPLSTAPICIDDSIES PMVLDTSVEEVEEKEPLSREAIITTVPEYAREIYANLREEELKNRAKSTYMKKQQDITTSMRSILIDWLVEVSEEYKLHR ETLFLTVNYIDRFLSQMAVQRGKLQLVGAASMFLAAKYEEIYPPDVGEFAYITDDTYTKKQVLRMESLILKVLSFDVAVP TANWFCDTFLKNCEADEKTRALAMFLLESTLIDSETYLKYLPSVVAAASTCLARCAMGLEPWEKLKILNLKWNAFQFFTQ SSIIENKRFQLN |
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