Gene
| Gene Model ID | pfu_aug2.0_100.1_00239 |
|---|---|
| Locus | scaffold100.1 : 339929 ... 343363 : + |
| To GenomeBrowser | scaffold100.1:339929..343363 |
| Genes list of scaffold | scaffold100.1 |
| Synonym | pfu_aug1.0_13246.1_68617 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| g-protein coupled receptor 54-like | GO:0004871 GO:0007165 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_100.1_00239.t1 | 1 | 1 | 7tm_1 | 37 | 122 | 6.1e-11 | 41.9 | 5.0e-15 | 7.5e-11 | 41.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_100.1_00239.t1 | gi|390349672|ref|XP_003727259.1| | PREDICTED: G-protein coupled receptor 54 [Strongylocentrotus purpuratus] | 3.0e-09 |
| pfu_aug2.0_100.1_00239.t1 | gi|585713023|ref|XP_006825017.1| | PREDICTED: G-protein coupled receptor 54-like [Saccoglossus kowalevskii] | 6.0e-09 |
| pfu_aug2.0_100.1_00239.t1 | gi|291231689|ref|XP_002735795.1| | PREDICTED: G-protein coupled receptor 54-like, partial [Saccoglossus kowalevskii] | 1.0e-08 |
| pfu_aug2.0_100.1_00239.t1 | gi|195158457|ref|XP_002020102.1| | GL13808 [Drosophila persimilis] | 4.0e-08 |
| pfu_aug2.0_100.1_00239.t1 | gi|675873836|ref|XP_009022478.1| | hypothetical protein HELRODRAFT_66825, partial [Helobdella robusta] | 5.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_100.1_00239.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_100.1_00239.t1 atgaatgactcggatgctactcatacaggagttagtccacatctcatttttggaccaacattgattcttatctccgccat cggcactactnttcatattctgaagaaagcgtgggagttctaccggcgatttcgtcccgctcaagtcagcggagttaatg cagaaagtaacagaattcgagctaaacagaaggctatcaagaacggcaaagtcatgggcattgtgacgctacttttcacc atatgttggctaccgcctcatatctaccaattttggtatggagtggagtttgagggaaagggtagcttcaatggcattat cttacttcttggaacattcaattgcataataaacccattcatttatgcctggcagaaagaagactttcgcaaagaaggca aaaaacacctaaaatgctgcaaacgtcaacaggtcgaggggagaaaagataagcatcaaaaggacgccatccctaaaggt agcactgacaaagaaagccccttcctttttggcagtattcaagtcgacagtactaagactacagcagctatctctggaga tttatcatatgatgcgaaccctgtggacgacaatcagataaaacaaccagaggacctcatggcaatcccacatgtagctg ataaataa |
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Protein
| Protein ID | pfu_aug2.0_100.1_00239.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_100.1_00239.t1 MNDSDATHTGVSPHLIFGPTLILISAIGTTXHILKKAWEFYRRFRPAQVSGVNAESNRIRAKQKAIKNGKVMGIVTLLFT ICWLPPHIYQFWYGVEFEGKGSFNGIILLLGTFNCIINPFIYAWQKEDFRKEGKKHLKCCKRQQVEGRKDKHQKDAIPKG STDKESPFLFGSIQVDSTKTTAAISGDLSYDANPVDDNQIKQPEDLMAIPHVADK |
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