Gene
| Gene Model ID | pfu_aug2.0_1002.1_08072 |
|---|---|
| Locus | scaffold1002.1 : 13736 ... 15659 : + |
| To GenomeBrowser | scaffold1002.1:13736..15659 |
| Genes list of scaffold | scaffold1002.1 |
| Synonym | pfu_aug1.0_89536.1_64053 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1002.1_08072.t1 | 1 | 1 | 7TM_GPCR_Srw | 3 | 201 | 5.2e-13 | 48.8 | 1.3e-16 | 6.5e-13 | 48.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1002.1_08072.t1 | gi|308478582|ref|XP_003101502.1| | hypothetical protein CRE_12892 [Caenorhabditis remanei] | 5.0e-06 |
| pfu_aug2.0_1002.1_08072.t1 | gi|675867634|ref|XP_009019377.1| | hypothetical protein HELRODRAFT_122641, partial [Helobdella robusta] | 5.0e-06 |
| pfu_aug2.0_1002.1_08072.t1 | gi|268558272|ref|XP_002637126.1| | Hypothetical protein CBG09628 [Caenorhabditis briggsae] | 6.0e-06 |
Transcript
| Transcript ID | pfu_aug2.0_1002.1_08072.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1002.1_08072.t1 atgaaagtgacctgcattgttttacttacacttattcctgcagcgatcattttgaatgtttatgaaatgttcgccattga aattgtggaactcaaaatctacactacagctgattataatgaatcgttaccttccggttgctacactcaatattcggaaa ccgtgaaatctactcttggtgatcctgatagatctaaagtggtattctatatcttcaatacgatatttgctcgtgtactc ccggttttgatactaactgtgacaactatcatacttgcagtggcattaaagaagggttctcggtcgatgacacaatacga tgctaatatacagcaggctaggaatatccaattcaaaaagataactatcatagttttcgcaatattagtcatatttttga ttgcagaactgcaggatggcattgcatttataatctacatcattgaactcgtactggataagaaataccagattttgtcg aaagagcagaccactctgtgggacactgttgcctcaactttgtcgcttctaagttatgcttgcaatttctggatcttttt tatgatgagtaaccagttcagatccgctttgataaacatgttgagacatccattcaagaaaattggtttaaagtgggctt ttgatactgaggaaccaggaacgtcagaaacaaatatgaaagggttaagaaagtcaacagacgatcaaagtcttttataa |
|
Protein
| Protein ID | pfu_aug2.0_1002.1_08072.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1002.1_08072.t1 MKVTCIVLLTLIPAAIILNVYEMFAIEIVELKIYTTADYNESLPSGCYTQYSETVKSTLGDPDRSKVVFYIFNTIFARVL PVLILTVTTIILAVALKKGSRSMTQYDANIQQARNIQFKKITIIVFAILVIFLIAELQDGIAFIIYIIELVLDKKYQILS KEQTTLWDTVASTLSLLSYACNFWIFFMMSNQFRSALINMLRHPFKKIGLKWAFDTEEPGTSETNMKGLRKSTDDQSLL |
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