Gene
| Gene Model ID | pfu_aug2.0_1002.1_08075 |
|---|---|
| Locus | scaffold1002.1 : 62572 ... 67585 : - |
| To GenomeBrowser | scaffold1002.1:62572..67585 |
| Genes list of scaffold | scaffold1002.1 |
| Synonym | pfu_aug1.0_7223.1_60208 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1002.1_08075.t1 | 2 | 1 | Apc3 | 20 | 34 | 5.1e-06 | 26.5 | 1.7 | 1400.0 | -0.6 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 1 | TPR_8 | 75 | 87 | 1.8e-11 | 42.9 | 3.6 | 3200.0 | -1.7 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 1 | TPR_12 | 99 | 140 | 4.6e-13 | 48.8 | 1.7e-06 | 0.0015 | 18.4 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 1 | TPR_17 | 106 | 130 | 2.5e-11 | 42.8 | 0.0021 | 1.9 | 8.9 |
| pfu_aug2.0_1002.1_08075.t1 | 3 | 1 | TPR_11 | 109 | 172 | 2.6e-17 | 62.2 | 9.4e-14 | 8.2e-11 | 41.3 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 2 | TPR_12 | 109 | 171 | 4.6e-13 | 48.8 | 2.9e-09 | 2.5e-06 | 27.3 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 2 | TPR_8 | 110 | 143 | 1.8e-11 | 42.9 | 2.5e-08 | 2.2e-05 | 23.9 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 1 | TPR_2 | 110 | 143 | 1.0e-17 | 62.5 | 4.4e-07 | 0.00038 | 20.1 |
| pfu_aug2.0_1002.1_08075.t1 | 3 | 1 | TPR_1 | 112 | 143 | 1.9e-14 | 52.5 | 3.3e-08 | 2.9e-05 | 23.4 |
| pfu_aug2.0_1002.1_08075.t1 | 3 | 1 | TPR_14 | 113 | 153 | 8.5e-10 | 38.3 | 6.1e-07 | 0.00053 | 20.3 |
| pfu_aug2.0_1002.1_08075.t1 | 3 | 1 | TPR_7 | 113 | 144 | 2.4e-06 | 26.8 | 0.00014 | 0.12 | 12.1 |
| pfu_aug2.0_1002.1_08075.t1 | 2 | 1 | TPR_19 | 124 | 165 | 3.8e-10 | 39.9 | 8.0e-09 | 7.0e-06 | 26.2 |
| pfu_aug2.0_1002.1_08075.t1 | 2 | 1 | TPR_16 | 124 | 166 | 4.5e-07 | 30.3 | 2.6e-06 | 0.0022 | 18.5 |
| pfu_aug2.0_1002.1_08075.t1 | 2 | 2 | Apc3 | 129 | 205 | 5.1e-06 | 26.5 | 3.3e-08 | 2.8e-05 | 24.1 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 2 | TPR_17 | 132 | 164 | 2.5e-11 | 42.8 | 8.1e-09 | 7.0e-06 | 25.8 |
| pfu_aug2.0_1002.1_08075.t1 | 3 | 2 | TPR_14 | 144 | 181 | 8.5e-10 | 38.3 | 0.00099 | 0.86 | 10.4 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 2 | TPR_2 | 144 | 175 | 1.0e-17 | 62.5 | 8.2e-05 | 0.072 | 13.0 |
| pfu_aug2.0_1002.1_08075.t1 | 3 | 2 | TPR_1 | 145 | 175 | 1.9e-14 | 52.5 | 0.064 | 56.0 | 3.5 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 3 | TPR_8 | 145 | 164 | 1.8e-11 | 42.9 | 0.19 | 170.0 | 2.3 |
| pfu_aug2.0_1002.1_08075.t1 | 3 | 2 | TPR_7 | 146 | 164 | 2.4e-06 | 26.8 | 0.0048 | 4.2 | 7.4 |
| pfu_aug2.0_1002.1_08075.t1 | 3 | 2 | TPR_11 | 182 | 214 | 2.6e-17 | 62.2 | 2.7e-06 | 0.0023 | 17.5 |
| pfu_aug2.0_1002.1_08075.t1 | 3 | 3 | TPR_1 | 184 | 214 | 1.9e-14 | 52.5 | 1.4e-07 | 0.00012 | 21.4 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 3 | TPR_17 | 184 | 200 | 2.5e-11 | 42.8 | 0.26 | 220.0 | 2.4 |
| pfu_aug2.0_1002.1_08075.t1 | 3 | 3 | TPR_14 | 184 | 221 | 8.5e-10 | 38.3 | 0.00014 | 0.12 | 13.0 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 3 | TPR_2 | 184 | 213 | 1.0e-17 | 62.5 | 1.3e-08 | 1.2e-05 | 24.8 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 3 | TPR_12 | 185 | 211 | 4.6e-13 | 48.8 | 4.3e-05 | 0.038 | 13.9 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 4 | TPR_8 | 185 | 212 | 1.8e-11 | 42.9 | 0.00027 | 0.23 | 11.2 |
| pfu_aug2.0_1002.1_08075.t1 | 3 | 3 | TPR_7 | 187 | 212 | 2.4e-06 | 26.8 | 0.089 | 78.0 | 3.4 |
| pfu_aug2.0_1002.1_08075.t1 | 2 | 2 | TPR_19 | 193 | 219 | 3.8e-10 | 39.9 | 0.00045 | 0.39 | 11.0 |
| pfu_aug2.0_1002.1_08075.t1 | 2 | 2 | TPR_16 | 195 | 221 | 4.5e-07 | 30.3 | 0.0029 | 2.5 | 8.8 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 4 | TPR_17 | 204 | 214 | 2.5e-11 | 42.8 | 1.3 | 1200.0 | 0.1 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 4 | TPR_12 | 268 | 279 | 4.6e-13 | 48.8 | 3.4 | 3000.0 | -1.8 |
| pfu_aug2.0_1002.1_08075.t1 | 3 | 3 | TPR_11 | 269 | 276 | 2.6e-17 | 62.2 | 8.8 | 7600.0 | -3.4 |
| pfu_aug2.0_1002.1_08075.t1 | 4 | 4 | TPR_2 | 269 | 275 | 1.0e-17 | 62.5 | 7.5 | 6600.0 | -2.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1002.1_08075.t1 | gi|676489506|ref|XP_009064959.1| | hypothetical protein LOTGIDRAFT_132288, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1002.1_08075.t1 | gi|242008505|ref|XP_002425044.1| | conserved hypothetical protein [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_1002.1_08075.t1 | gi|642936654|ref|XP_008198525.1| | PREDICTED: uncharacterized protein LOC662391 isoform X2 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_1002.1_08075.t1 | gi|675855196|ref|XP_009013158.1| | hypothetical protein HELRODRAFT_74694, partial [Helobdella robusta] | 0.0 |
| pfu_aug2.0_1002.1_08075.t1 | gi|642936652|ref|XP_008198524.1| | PREDICTED: tetratricopeptide repeat protein 17-like isoform X1 [Tribolium castaneum] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1002.1_08075.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1002.1_08075.t1 atgataaagaaaaaagtgttcatcgagtccaacaaagtgagctgcgcagacagtagggtatttggattgaatgcagctaa gtgcatgtataatcaaagcgaacaatcagaaaagaaacagccctccttgacgtgtggaaagccggccaatgagactcagt acgaccatttacggggaatcaccaataggaacgaacatagccatataccagaaccggaggttgctctcatcttcaaaaag aaaggcaataaaaattcccagataacagtagatgtaaatgagttagaagaaaaactcagaaaagccaaaaaagagaagcc taagtcagcccatgtgtacaaccagattggcaacttctggcggataaaaggcaatacacagttatccatagaatgtttcc gcaaagctttatccataagtccaaacaatccagaagtcttgttgaacttagctcgggtgctattcaatttacaatatctt gacgatgccatatttttgacgagacgttcattggtcatgcagcctgctacccagaattcctggttacaacattttacgtt aggtgaaattttgaaagcatacggacattatcaggaagcttctcaacattttaaacatgcgttagacttgaaccctggtt ttcagccggcccaagcgcacctacgagagatggaaggaatacccgcgccgtctgttactcagtatactttgttcattatt ctatttttagtattaggagttgtgttcggcgttataacgtctatcgagacaaaatttgacgacggcggggaggttaaaac acgacgacattttaatcgtgctatggccatgagatcaatccgtctgggtctaaatccaagattgattaggatgaggaaaa tgaatggctga |
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Protein
| Protein ID | pfu_aug2.0_1002.1_08075.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1002.1_08075.t1 MIKKKVFIESNKVSCADSRVFGLNAAKCMYNQSEQSEKKQPSLTCGKPANETQYDHLRGITNRNEHSHIPEPEVALIFKK KGNKNSQITVDVNELEEKLRKAKKEKPKSAHVYNQIGNFWRIKGNTQLSIECFRKALSISPNNPEVLLNLARVLFNLQYL DDAIFLTRRSLVMQPATQNSWLQHFTLGEILKAYGHYQEASQHFKHALDLNPGFQPAQAHLREMEGIPAPSVTQYTLFII LFLVLGVVFGVITSIETKFDDGGEVKTRRHFNRAMAMRSIRLGLNPRLIRMRKMNG |
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