Gene
| Gene Model ID | pfu_aug2.0_1002.1_08079 |
|---|---|
| Locus | scaffold1002.1 : 133596 ... 163929 : + |
| To GenomeBrowser | scaffold1002.1:133596..163929 |
| Genes list of scaffold | scaffold1002.1 |
| Synonym | pfu_aug1.0_2605.1_23032 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| chloride channel protein partial | GO:0005247 GO:0006821 GO:0016020 GO:0034220 GO:0044070 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1002.1_08079.t2 | 1 | 1 | Voltage_CLC | 44 | 444 | 0.0 | 262.8 | 0.0 | 0.0 | 262.5 |
| pfu_aug2.0_1002.1_08079.t2 | 2 | 1 | CBS | 478 | 516 | 3.6e-06 | 26.6 | 0.00011 | 0.84 | 9.4 |
| pfu_aug2.0_1002.1_08079.t2 | 2 | 2 | CBS | 712 | 754 | 3.6e-06 | 26.6 | 3.1e-06 | 0.023 | 14.4 |
Transcript
| Transcript ID | pfu_aug2.0_1002.1_08079.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1002.1_08079.t1 atggctttgttaagttttactatggattatattatagaacagtgccaagaagccaaaacttggttatacgaggagctctc attttccgttacgttacagtattttgcctggataggttactctatactatttatactttttgccactggattcactcatc ttgtttcaccgcaggccgtggggtcaggtattcctgagatgaagacgattctaagaggagtggtattaaaagaattcctg acacttaaagctctgatctcaaaagttgtcgggctgtgttcatccctcggcagtacgctaccaatcggaaaagagggtcc gtttgtgcacatagccagtatagtggcgacattattggggaaactcacctctttcaagggaatttacgagaatgagtccc gtaggactgagatgcttgctgcagcctgtgctgttggagtagctgggacatttgcagctcctataggaggtgtgctgttt agtattgaagtcacagcgacatattttgccgtgcggaattactggcgaggattttttgctgccgtttgtggggcggtcgt atttagattattggctatatggttcacagaagaaaccacaattaccgctgtgttcaaaactaacctcaggacagagtttc cgttcgatgccttagaattgtttgcttatgcgtttattggggttttatgtgggtttgctggtgccttattcatacttttt catcgaaaaattgttttgtttacgagaaaaaagaaaagattatcaaattttttacaaaaaaatcgatttatatacccagg tattgtagcttttacaatagcttcacttacatttcctccgggttttgggcagttcttcgcagggcagcttacagctcgac aggccatcaatgaattgtttagtaatataacatggacgacaggacaggctgaagatattaatgatgaagaaatactgagc cactggaatcatcctttaacaaatatttatgtaacgcttactctttttatagtcatgaacttttggtttggggccatatg taataccatgcctattccggctggtgtgtttgtacctgtttttactgtaggtgcggcttttggtcgtttgattggtgaag ctatggcggcgtggttcccagacggtgtaccatctggaaaagaaatatataaaatagtacctgggggatacgcagttgtg ggagctgcgtctttctcaggagctgtcactcgtaccatatctacgtctgttatagtgtttgaggtcacaggtcaaatatc tcatgttctaccagctgtgttagccgtcttaatagccaatgccatagctaacaagttacagccatccttctacgacagta tcataaaacttaaacggcttccatatttaccagatattgtgtcggcaaaagccaatgcatggcacgtatttgtagaggat attatggtaaaagacgtaaaatctataaagttcacatcaagttatggagagttacaagaacttctagaattgaccaactt caaaagctatccattagtagactcgccagattcttacatacttctgggttccatacagcgatatgagctagagagaatct tatttgttcaccttagcaaagagcagaaaatcgtacttccacaggattctcctggagggtcgaaaccggggtcaaggtca accacgccccctcccactataattccaacaattgttgaacctaaaaagtcaaggtttcaggtgtcaaaggtcacggaaaa cgagagagccaaaacgccacctcctgccacgcttagtatcccacgttcgatgttaagagattcacatctgagctcttctg ctttggaggaacaaaattaccacacattacagctccccttaaggtcaattttgaaaaattctgcatccaatgggcgactt ggagaaaaatcaaatagctcggcagatctgaaatctgaaataaatgcatactacagaaaaatgtcggaacagagaaaaga aagcatactggaggacagaccatttattattgataaaggaagtctctctgatctgacaaagaaagtcaaattgcaaaagg aatgggaagacaataaattactagaacatatagactgggagggggtccagattgaccccgcccctttccaacttgtggag cgtacatctttacacaaggttcattcgttattttctttacttggattacatcatgcttacgtcacaaataccggaagact tgtgggagtatgtggtctcaaagagttacgtcacgctatccagggccgtatagatgagcaggctctagccaaaactcagc gtccggaaatcaacatcgaggtggatcaagaatcgagcagtgatgatgaggtggaggacatcgatcctcagaacctcgaa gtcgacagagaagctcctcggggaactaaatatagactggttaacaccgctagtctagacgaagtggaattagaacctat agaaaaggcgtga |
|
| Transcript ID | pfu_aug2.0_1002.1_08079.t2 |
| Definition | - |
>pfu_aug2.0_1002.1_08079.t2 atggctttgttaagttttactatggattatattatagaacagtgccaagaagccaaaacttggttatacgaggagctctc attttccgttacgttacagtattttgcctggataggttactctatactatttatactttttgccactggattcactcatc ttgtttcaccgcaggccgtggggtcaggtattcctgagatgaagacgattctaagaggagtggtattaaaagaattcctg acacttaaagctctgatctcaaaagttgtcgggctgtgttcatccctcggcagtacgctaccaatcggaaaagagggtcc gtttgtgcacatagccagtatagtggcgacattattggggaaactcacctctttcaagggaatttacgagaatgagtccc gtaggactgagatgcttgctgcagcctgtgctgttggagtagctgggacatttgcagctcctataggaggtgtgctgttt agtattgaagtcacagcgacatattttgccgtgcggaattactggcgaggattttttgctgccgtttgtggggcggtcgt atttagattattggctatatggttcacagaagaaaccacaattaccgctgtgttcaaaactaacctcaggacagagtttc cgttcgatgccttagaattgtttgcttatgcgtttattggggttttatgtgggtttgctggtgccttattcatacttttt catcgaaaaattgttttgtttacgagaaaaaagaaaagattatcaaattttttacaaaaaaatcgatttatatacccagg tattgtagcttttacaatagcttcacttacatttcctccgggttttgggcagttcttcgcagggcagcttacagctcgac aggccatcaatgaattgtttagtaatataacatggacgacaggacaggctgaagatattaatgatgaagaaatactgagc cactggaatcatcctttaacaaatatttatgtaacgcttactctttttatagtcatgaacttttggtttggggccatatg taataccatgcctattccggctggtgtgtttgtacctgtttttactgtaggtgcggcttttggtcgtttgattggtgaag ctatggcggcgtggttcccagacggtgtaccatctggaaaagaaatatataaaatagtacctgggggatacgcagttgtg ggagctgcgtctttctcaggagctgtcactcgtaccatatctacgtctgttatagtgtttgaggtcacaggtcaaatatc tcatgttctaccagctgtgttagccgtcttaatagccaatgccatagctaacaagttacagccatccttctacgacagta tcataaaacttaaacggcttccatatttaccagatattgtgtcggcaaaagccaatgcatggcacgtatttgtagaggat attatggtaaaagacgtaaaatctataaagttcacatcaagttatggagagttacaagaacttctagaattgaccaactt caaaagctatccattagtagactcgccagattcttacatacttctgggttccatacagcgatatgagctagagagaatct tatttgttcaccttagcaaagagcagaaaatcgtacttccacaggattctcctggagggtcgaaaccggggtcaaggtca accacgccccctcccactataattccaacaattgttgaacctaaaaagtcaaggtttcaggtgtcaaaggtcacggaaaa cgagagagccaaaacgccacctcctgccacgcttagtatcccacgttcgctgagctcttctgctttggaggaacaaaatt accacacattacagctccccttaaggtcaattttgaaaaattctgcatccaatgggcgacttggagaaaaatcaaatagc tcggcagatctgaaatctgaaataaatgcatactacagaaaaatgtcggaacagagaaaagaaagcatactggaggacag accatttattattgataaaggaagtctctctgatctgacaaagaaagtcaaattgcaaaaggaatgggaagacaataaat tactagaacatatagactgggagggggtccagattgaccccgcccctttccaacttgtggagcgtacatctttacacaag gttcattcgttattttctttacttggattacatcatgcttacgtcacaaataccggaagacttgtgggagtatgtggtct caaagagttacgtcacgctatccagggccgtatagatgagcaggctctagccaaaactcagcgtccggaaatcaacatcg aggtggatcaagaatcgagcagtgatgatgaggtggaggacatcgatcctcagaacctcgaagtcgacagagaagctcct cggggaactaaatatagactggttaacaccgctagtctagacgaagtggaattagaacctatagaaaaggcgtga |
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Protein
| Protein ID | pfu_aug2.0_1002.1_08079.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1002.1_08079.t1 MALLSFTMDYIIEQCQEAKTWLYEELSFSVTLQYFAWIGYSILFILFATGFTHLVSPQAVGSGIPEMKTILRGVVLKEFL TLKALISKVVGLCSSLGSTLPIGKEGPFVHIASIVATLLGKLTSFKGIYENESRRTEMLAAACAVGVAGTFAAPIGGVLF SIEVTATYFAVRNYWRGFFAAVCGAVVFRLLAIWFTEETTITAVFKTNLRTEFPFDALELFAYAFIGVLCGFAGALFILF HRKIVLFTRKKKRLSNFLQKNRFIYPGIVAFTIASLTFPPGFGQFFAGQLTARQAINELFSNITWTTGQAEDINDEEILS HWNHPLTNIYVTLTLFIVMNFWFGAICNTMPIPAGVFVPVFTVGAAFGRLIGEAMAAWFPDGVPSGKEIYKIVPGGYAVV GAASFSGAVTRTISTSVIVFEVTGQISHVLPAVLAVLIANAIANKLQPSFYDSIIKLKRLPYLPDIVSAKANAWHVFVED IMVKDVKSIKFTSSYGELQELLELTNFKSYPLVDSPDSYILLGSIQRYELERILFVHLSKEQKIVLPQDSPGGSKPGSRS TTPPPTIIPTIVEPKKSRFQVSKVTENERAKTPPPATLSIPRSMLRDSHLSSSALEEQNYHTLQLPLRSILKNSASNGRL GEKSNSSADLKSEINAYYRKMSEQRKESILEDRPFIIDKGSLSDLTKKVKLQKEWEDNKLLEHIDWEGVQIDPAPFQLVE RTSLHKVHSLFSLLGLHHAYVTNTGRLVGVCGLKELRHAIQGRIDEQALAKTQRPEINIEVDQESSSDDEVEDIDPQNLE VDREAPRGTKYRLVNTASLDEVELEPIEKA |
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| Protein ID | pfu_aug2.0_1002.1_08079.t2 |
| Definition | - |
>pfu_aug2.0_1002.1_08079.t2 MALLSFTMDYIIEQCQEAKTWLYEELSFSVTLQYFAWIGYSILFILFATGFTHLVSPQAVGSGIPEMKTILRGVVLKEFL TLKALISKVVGLCSSLGSTLPIGKEGPFVHIASIVATLLGKLTSFKGIYENESRRTEMLAAACAVGVAGTFAAPIGGVLF SIEVTATYFAVRNYWRGFFAAVCGAVVFRLLAIWFTEETTITAVFKTNLRTEFPFDALELFAYAFIGVLCGFAGALFILF HRKIVLFTRKKKRLSNFLQKNRFIYPGIVAFTIASLTFPPGFGQFFAGQLTARQAINELFSNITWTTGQAEDINDEEILS HWNHPLTNIYVTLTLFIVMNFWFGAICNTMPIPAGVFVPVFTVGAAFGRLIGEAMAAWFPDGVPSGKEIYKIVPGGYAVV GAASFSGAVTRTISTSVIVFEVTGQISHVLPAVLAVLIANAIANKLQPSFYDSIIKLKRLPYLPDIVSAKANAWHVFVED IMVKDVKSIKFTSSYGELQELLELTNFKSYPLVDSPDSYILLGSIQRYELERILFVHLSKEQKIVLPQDSPGGSKPGSRS TTPPPTIIPTIVEPKKSRFQVSKVTENERAKTPPPATLSIPRSLSSSALEEQNYHTLQLPLRSILKNSASNGRLGEKSNS SADLKSEINAYYRKMSEQRKESILEDRPFIIDKGSLSDLTKKVKLQKEWEDNKLLEHIDWEGVQIDPAPFQLVERTSLHK VHSLFSLLGLHHAYVTNTGRLVGVCGLKELRHAIQGRIDEQALAKTQRPEINIEVDQESSSDDEVEDIDPQNLEVDREAP RGTKYRLVNTASLDEVELEPIEKA |
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