Gene
| Gene Model ID | pfu_aug2.0_1008.1_27974 |
|---|---|
| Locus | scaffold1008.1 : 13349 ... 26475 : - |
| To GenomeBrowser | scaffold1008.1:13349..26475 |
| Genes list of scaffold | scaffold1008.1 |
| Synonym | pfu_aug1.0_650.1_65564 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1008.1_27974.t1 | 2 | 1 | Lectin_C | 40 | 64 | 5.6e-10 | 39.7 | 0.16 | 2400.0 | -0.8 |
| pfu_aug2.0_1008.1_27974.t1 | 2 | 2 | Lectin_C | 110 | 180 | 5.6e-10 | 39.7 | 3.8e-14 | 5.6e-10 | 39.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1008.1_27974.t1 | gi|755892579|ref|XP_011295084.1| | PREDICTED: perlucin-like protein [Musca domestica] | 3.0e-15 |
| pfu_aug2.0_1008.1_27974.t1 | gi|260787715|ref|XP_002588897.1| | hypothetical protein BRAFLDRAFT_89085 [Branchiostoma floridae] | 4.0e-15 |
| pfu_aug2.0_1008.1_27974.t1 | gi|755892583|ref|XP_011295085.1| | PREDICTED: perlucin-like protein [Musca domestica] | 1.0e-14 |
| pfu_aug2.0_1008.1_27974.t1 | gi|260783528|ref|XP_002586826.1| | hypothetical protein BRAFLDRAFT_247755 [Branchiostoma floridae] | 2.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_1008.1_27974.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1008.1_27974.t1 atgatgcaagcacaaacgaggattgtatggagttacagggtatattctcatttcactggaatgacatggattgtaccagg cgggaacacttcatctgtgagactgacttccgcggactgtagagatggctgggtgaagttccatggttcttgctacctca tagctctacaacaagcaacatgggcagaggcagaggcatatggttttgtcatattcattatctgtgaagacgatatagga ggggaagttcataaatccacgaggtctttctctaatttcatacaattcaaaagctcagtaacatgtatatatcgaacagc atccacactggctaactcatactggattggcggaaatgacattcagaatgagggtatctttaagtggtacaggagtgata cagatctaacttttactgactggaatccagggcagcctgacgatgcggggacaaatgaagattgtatggagctacagggt atattctcctatcactggaacgaccataactgtgacatgaagcaacacttcatctgtgaagctaagtcagtctacatcga gcctaaccaaatcataggataa |
|
Protein
| Protein ID | pfu_aug2.0_1008.1_27974.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1008.1_27974.t1 MMQAQTRIVWSYRVYSHFTGMTWIVPGGNTSSVRLTSADCRDGWVKFHGSCYLIALQQATWAEAEAYGFVIFIICEDDIG GEVHKSTRSFSNFIQFKSSVTCIYRTASTLANSYWIGGNDIQNEGIFKWYRSDTDLTFTDWNPGQPDDAGTNEDCMELQG IFSYHWNDHNCDMKQHFICEAKSVYIEPNQIIG |
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