Gene
| Gene Model ID | pfu_aug2.0_101.1_03609 |
|---|---|
| Locus | scaffold101.1 : 173488 ... 186170 : + |
| To GenomeBrowser | scaffold101.1:173488..186170 |
| Genes list of scaffold | scaffold101.1 |
| Synonym | pfu_aug1.0_13851.1_39554 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_101.1_03609.t1 | 3 | 1 | Rep_fac-A_C | 9 | 101 | 9.3e-10 | 38.3 | 1.3e-13 | 9.3e-10 | 38.3 |
| pfu_aug2.0_101.1_03609.t1 | 3 | 2 | Rep_fac-A_C | 322 | 354 | 9.3e-10 | 38.3 | 1.1 | 8200.0 | -3.7 |
| pfu_aug2.0_101.1_03609.t1 | 3 | 3 | Rep_fac-A_C | 463 | 495 | 9.3e-10 | 38.3 | 0.29 | 2100.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_101.1_03609.t1 | gi|676440489|ref|XP_009049193.1| | hypothetical protein LOTGIDRAFT_112960, partial [Lottia gigantea] | 1.0e-21 |
| pfu_aug2.0_101.1_03609.t1 | gi|260781614|ref|XP_002585900.1| | hypothetical protein BRAFLDRAFT_256675 [Branchiostoma floridae] | 1.0e-18 |
| pfu_aug2.0_101.1_03609.t1 | gi|742243501|ref|XP_010863266.1| | PREDICTED: DNA damage-induced apoptosis suppressor protein [Esox lucius] | 2.0e-16 |
| pfu_aug2.0_101.1_03609.t1 | gi|524909367|ref|XP_005109731.1| | PREDICTED: uncharacterized protein LOC101847533 isoform X1 [Aplysia californica] | 7.0e-16 |
| pfu_aug2.0_101.1_03609.t1 | gi|260812195|ref|XP_002600806.1| | hypothetical protein BRAFLDRAFT_229358 [Branchiostoma floridae] | 5.0e-15 |
Transcript
| Transcript ID | pfu_aug2.0_101.1_03609.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03609.t1 atgtcagagaaaagactgctgattctagccactgtaacaggaatcaaagacacacattgtacctacccatgttgtaccag atgttattctaaactcttacatgattatgaactacagagatggcgttgtgtgaaatgttaccatggttacgctgaggagg agatgagctggagattccggttatcagtacttataacggatggagtcaattcctgtaacgtttgtttgtttggtagcact ctggataagttctttggggataaagcaaaagtattttcaaggaatattgagagtcatgaaaggagacatgggaactctga aaatcttctgaagctggcaatgcatgaagtttttgtcggtcggaatttatacttcggttttaggattccatcttatgctg taccaaataaaactgccatgctgaaggatgtgattcagtactatgaaaccaacagtgttaagcatacacagccaacacag tcagaagatgggatttacaactctaatatcattgcctaccagttgataccctccactgatgcaaagatcatcactgtcac tgagaaattccacattgatggtaaaacagaaactccacattgtgccaattctatagcagccacttgtcccacagccactg actgtaaaacggacgagacgtttgacggatcctattcctgtctgaatgagacatttgaccttaatgaacttggtgagggt gatgatgttgaaggttctgatgataaagagaatattcctgttaaaaatcagtctgcagcatctgtagggtccgaaattag tgtttttgaaaattcaaaaaagaaagaaattagtggtgtaaacgaatcagtgctgatgttagatggatcagctgacctct tcgaaacgtcaaatttcttatcacaagtggtgacacctaatatttctacatgtatgcctgagaggaattttaaatggaaa tctgtgaaaaggacgaaaaatgttcaatttgcaaaaagacttagtcatgtgaaaacaacacatcttattgatttacagat gaaaatgaatgctatgaaggcaaaatctaccatcactcccttaccaatcagatcttgtctaaacactgtgccagtaatac attttcaagaaagtgaggaattatttagtcaacaaaattcaacacataatggcagtgttcagttaaattctttctattct caagaaatttttactccaagtcctatctgtatgaataaatcggcagagtatgaagtttcccataattctttgcttgataa tgacgacatctctgacaacagaatgtcaactccagtagatagctgtaattatgacagccaatctatattattttcagatt tatctaatatgtcaaaatcttttgctgcctccaaatcacaaagtaatgatacagaaaatttgtctccccatcttgagttt tctcatcatgtctttagtagtaaatcccatgatgcatcagtcaagatgacagatattgagaatagtgcattttctgcctc tcaagatttgtttagtccagaatgctctcagaatgtactgtcttcctctgagacaagcttacctgtcaaaaaactttttt gtgattga |
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Protein
| Protein ID | pfu_aug2.0_101.1_03609.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03609.t1 MSEKRLLILATVTGIKDTHCTYPCCTRCYSKLLHDYELQRWRCVKCYHGYAEEEMSWRFRLSVLITDGVNSCNVCLFGST LDKFFGDKAKVFSRNIESHERRHGNSENLLKLAMHEVFVGRNLYFGFRIPSYAVPNKTAMLKDVIQYYETNSVKHTQPTQ SEDGIYNSNIIAYQLIPSTDAKIITVTEKFHIDGKTETPHCANSIAATCPTATDCKTDETFDGSYSCLNETFDLNELGEG DDVEGSDDKENIPVKNQSAASVGSEISVFENSKKKEISGVNESVLMLDGSADLFETSNFLSQVVTPNISTCMPERNFKWK SVKRTKNVQFAKRLSHVKTTHLIDLQMKMNAMKAKSTITPLPIRSCLNTVPVIHFQESEELFSQQNSTHNGSVQLNSFYS QEIFTPSPICMNKSAEYEVSHNSLLDNDDISDNRMSTPVDSCNYDSQSILFSDLSNMSKSFAASKSQSNDTENLSPHLEF SHHVFSSKSHDASVKMTDIENSAFSASQDLFSPECSQNVLSSSETSLPVKKLFCD |
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