Gene
| Gene Model ID | pfu_aug2.0_101.1_03611 |
|---|---|
| Locus | scaffold101.1 : 212718 ... 222712 : + |
| To GenomeBrowser | scaffold101.1:212718..222712 |
| Genes list of scaffold | scaffold101.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_101.1_03611.t1 | 5 | 1 | zf-C2H2 | 46 | 61 | 3.8e-06 | 26.9 | 0.046 | 34.0 | 5.0 |
| pfu_aug2.0_101.1_03611.t1 | 4 | 1 | zf-H2C2_2 | 51 | 76 | 4.7e-08 | 32.9 | 0.03 | 22.0 | 5.5 |
| pfu_aug2.0_101.1_03611.t1 | 5 | 2 | zf-C2H2 | 68 | 78 | 3.8e-06 | 26.9 | 0.14 | 110.0 | 3.4 |
| pfu_aug2.0_101.1_03611.t1 | 4 | 2 | zf-H2C2_2 | 95 | 102 | 4.7e-08 | 32.9 | 0.91 | 680.0 | 0.8 |
| pfu_aug2.0_101.1_03611.t1 | 5 | 3 | zf-C2H2 | 95 | 106 | 3.8e-06 | 26.9 | 0.46 | 340.0 | 1.9 |
| pfu_aug2.0_101.1_03611.t1 | 4 | 3 | zf-H2C2_2 | 113 | 135 | 4.7e-08 | 32.9 | 0.00028 | 0.2 | 11.9 |
| pfu_aug2.0_101.1_03611.t1 | 5 | 4 | zf-C2H2 | 122 | 146 | 3.8e-06 | 26.9 | 3.4e-07 | 0.00025 | 21.1 |
| pfu_aug2.0_101.1_03611.t1 | 4 | 4 | zf-H2C2_2 | 141 | 163 | 4.7e-08 | 32.9 | 1.9e-08 | 1.4e-05 | 25.0 |
| pfu_aug2.0_101.1_03611.t1 | 5 | 5 | zf-C2H2 | 152 | 173 | 3.8e-06 | 26.9 | 0.00036 | 0.27 | 11.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_101.1_03611.t1 | gi|585159605|ref|XP_006732064.1| | PREDICTED: zinc finger protein 91-like [Leptonychotes weddellii] | 1.0e-12 |
| pfu_aug2.0_101.1_03611.t1 | gi|528477962|ref|XP_003198585.2| | PREDICTED: zinc finger protein 665-like [Danio rerio] | 4.0e-12 |
| pfu_aug2.0_101.1_03611.t1 | gi|594657415|ref|XP_007177051.1| | PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 510 [Balaenoptera acutorostrata scammoni] | 1.0e-11 |
| pfu_aug2.0_101.1_03611.t1 | gi|688550901|ref|XP_009299052.1| | PREDICTED: gastrula zinc finger protein XlCGF8.2DB-like, partial [Danio rerio] | 3.0e-11 |
| pfu_aug2.0_101.1_03611.t1 | gi|664776431|ref|XP_008507497.1| | PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 256-like [Equus przewalskii] | 3.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_101.1_03611.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03611.t1 atggatagacataactgagatacaaccgaaaagaaagatgggacctttatgaaagcttctgcttccactaagcaagtaag gatgtcagtattacataaggaacacgagacaccttctagtgatgagatgagtgaaaagagtatctcaagacgatatcaca tgaaacatcacatggaaatgcatgggactccttacattgtccagtgcaaacaatgtcatagccattttaatctatcagaa acgccaagattttatgatacatttgatcgcgaaaagaatttgtgcgagaaatgcggaaacacttcagcaagtacaagtga tatgatcattatacaaaaacagcattttattgaaaatcggaattttgtatgcccttttgaagaatgtggaaagaggttta gtagaaaaacgaaatatgatgatcatataaatattcatactggtgtaaggccatttgaatgttcagtttgttatcgtaca tttacctccagatatacaaggaattctcattatgtaatttgcagcaagaaaaatcaaatgtcttag |
|
Protein
| Protein ID | pfu_aug2.0_101.1_03611.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03611.t1 MDRHNXDTTEKKDGTFMKASASTKQVRMSVLHKEHETPSSDEMSEKSISRRYHMKHHMEMHGTPYIVQCKQCHSHFNLSE TPRFYDTFDREKNLCEKCGNTSASTSDMIIIQKQHFIENRNFVCPFEECGKRFSRKTKYDDHINIHTGVRPFECSVCYRT FTSRYTRNSHYVICSKKNQMS |
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