Gene
| Gene Model ID | pfu_aug2.0_101.1_03613 |
|---|---|
| Locus | scaffold101.1 : 228888 ... 236442 : + |
| To GenomeBrowser | scaffold101.1:228888..236442 |
| Genes list of scaffold | scaffold101.1 |
| Synonym | pfu_aug1.0_801.1_22300 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_101.1_03613.t1 | 2 | 1 | zf-C2H2_4 | 54 | 76 | 5.9e-06 | 26.2 | 0.00045 | 0.66 | 10.4 |
| pfu_aug2.0_101.1_03613.t1 | 2 | 2 | zf-C2H2_4 | 82 | 104 | 5.9e-06 | 26.2 | 1.5e-07 | 0.00022 | 21.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_101.1_03613.t1 | gi|554846826|ref|XP_005933731.1| | PREDICTED: zinc finger protein 660-like [Haplochromis burtoni] | 5.0e-09 |
| pfu_aug2.0_101.1_03613.t1 | gi|742088937|ref|XP_010887818.1| | PREDICTED: zinc finger protein 620-like [Esox lucius] | 8.0e-09 |
| pfu_aug2.0_101.1_03613.t1 | gi|524893195|ref|XP_005103117.1| | PREDICTED: uncharacterized protein LOC101860669 [Aplysia californica] | 1.0e-08 |
| pfu_aug2.0_101.1_03613.t1 | gi|548408241|ref|XP_005740259.1| | PREDICTED: zinc finger protein 17-like [Pundamilia nyererei] | 1.0e-08 |
| pfu_aug2.0_101.1_03613.t1 | gi|542204658|ref|XP_005476008.1| | PREDICTED: zinc finger protein 629-like [Oreochromis niloticus] | 2.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_101.1_03613.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03613.t1 atgacttgcggaaaatctatgaatgtcggatatgccactacagtcatactacaaagagcaaacttgtacgacatctcaag actcactccactagaaagcccttgtacggtgagtagagtccatgaatcgccagggaatggtccacaaggcgaaggatcgt tctcttgttcacaatgttcctttacttcctcatggcgatgcagtctccgccgacacgagcgttgtcaccagagcctcaga cctcatacatgcggtttttgtaaacgctccttcaaacgggctgatcatcttcagagtcatataaaaagtcacttcggcct aagacgatctaagttatcatag |
|
Protein
| Protein ID | pfu_aug2.0_101.1_03613.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03613.t1 MTCGKSMNVGYATTVILQRANLYDISRLTPLESPCTVSRVHESPGNGPQGEGSFSCSQCSFTSSWRCSLRRHERCHQSLR PHTCGFCKRSFKRADHLQSHIKSHFGLRRSKLS |
|