Gene
| Gene Model ID | pfu_aug2.0_101.1_03614 |
|---|---|
| Locus | scaffold101.1 : 249248 ... 254566 : + |
| To GenomeBrowser | scaffold101.1:249248..254566 |
| Genes list of scaffold | scaffold101.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_101.1_03614.t1 | 2 | 1 | zf-C2H2_4 | 26 | 48 | 2.8e-09 | 36.6 | 1.5e-05 | 0.011 | 15.9 |
| pfu_aug2.0_101.1_03614.t1 | 2 | 1 | GAGA | 26 | 48 | 3.5e-09 | 36.1 | 6.2e-05 | 0.046 | 13.3 |
| pfu_aug2.0_101.1_03614.t1 | 2 | 1 | zf-C2H2 | 26 | 48 | 2.1e-07 | 30.8 | 0.0018 | 1.3 | 9.4 |
| pfu_aug2.0_101.1_03614.t1 | 2 | 1 | zf-H2C2_5 | 26 | 44 | 2.2e-07 | 30.6 | 0.0016 | 1.2 | 9.5 |
| pfu_aug2.0_101.1_03614.t1 | 3 | 1 | zf-H2C2_2 | 26 | 33 | 6.0e-06 | 26.2 | 0.029 | 22.0 | 5.5 |
| pfu_aug2.0_101.1_03614.t1 | 3 | 2 | zf-H2C2_2 | 41 | 60 | 6.0e-06 | 26.2 | 0.00016 | 0.12 | 12.7 |
| pfu_aug2.0_101.1_03614.t1 | 2 | 2 | zf-C2H2_4 | 54 | 77 | 2.8e-09 | 36.6 | 1.5e-07 | 0.00011 | 22.2 |
| pfu_aug2.0_101.1_03614.t1 | 2 | 2 | zf-C2H2 | 54 | 77 | 2.1e-07 | 30.8 | 1.2e-07 | 8.8e-05 | 22.6 |
| pfu_aug2.0_101.1_03614.t1 | 2 | 2 | zf-H2C2_5 | 54 | 78 | 2.2e-07 | 30.6 | 4.4e-07 | 0.00033 | 20.7 |
| pfu_aug2.0_101.1_03614.t1 | 2 | 2 | GAGA | 56 | 81 | 3.5e-09 | 36.1 | 8.0e-08 | 5.9e-05 | 22.5 |
| pfu_aug2.0_101.1_03614.t1 | 3 | 3 | zf-H2C2_2 | 68 | 81 | 6.0e-06 | 26.2 | 0.0029 | 2.2 | 8.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_101.1_03614.t1 | gi|557779442|ref|XP_005189348.1| | PREDICTED: transcription factor grauzone-like [Musca domestica] | 2.0e-06 |
| pfu_aug2.0_101.1_03614.t1 | gi|557779452|ref|XP_005189353.1| | PREDICTED: transcription factor grauzone-like [Musca domestica] | 4.0e-06 |
| pfu_aug2.0_101.1_03614.t1 | gi|82538724|ref|XP_723796.1| | hypothetical protein [Plasmodium yoelii yoelii 17XNL] | 5.0e-06 |
| pfu_aug2.0_101.1_03614.t1 | gi|70934357|ref|XP_738417.1| | Zinc finger transcription factor (krox1), partial [Plasmodium chabaudi chabaudi] | 1.0e-05 |
Transcript
| Transcript ID | pfu_aug2.0_101.1_03614.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03614.t1 atggtagagcatggtagcaacaacattatgatgtttatgctgaaaggtactgacggcacacccaaggaacgtcgacagtg tcctatatgtggctttgtttccaggaatgccaagggagctaggaaacatcttatttacacacattcgaacgcttactatt acaagtgtcccctatgtgatcacatcgtgaaacgcagcgataatctgaggagacatatagcaaagtcacatggaaaagac ccagatgacttcgtgaaagacccaaacgattttatatgtaaataa |
|
Protein
| Protein ID | pfu_aug2.0_101.1_03614.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03614.t1 MVEHGSNNIMMFMLKGTDGTPKERRQCPICGFVSRNAKGARKHLIYTHSNAYYYKCPLCDHIVKRSDNLRRHIAKSHGKD PDDFVKDPNDFICK |
|