Gene
| Gene Model ID | pfu_aug2.0_101.1_03619 |
|---|---|
| Locus | scaffold101.1 : 327629 ... 351237 : - |
| To GenomeBrowser | scaffold101.1:327629..351237 |
| Genes list of scaffold | scaffold101.1 |
| Synonym | pfu_aug1.0_23256.1_62211 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_101.1_03619.t1 | 1 | 1 | BTB | 22 | 123 | 8.7e-15 | 54.6 | 2.4e-17 | 2.3e-14 | 53.2 |
| pfu_aug2.0_101.1_03619.t1 | 4 | 1 | zf-C2H2 | 631 | 653 | 1.9e-12 | 46.7 | 0.00021 | 0.21 | 12.0 |
| pfu_aug2.0_101.1_03619.t1 | 4 | 1 | zf-C2H2_4 | 632 | 653 | 1.1e-12 | 47.3 | 0.00026 | 0.25 | 11.7 |
| pfu_aug2.0_101.1_03619.t1 | 4 | 2 | zf-C2H2_4 | 659 | 679 | 1.1e-12 | 47.3 | 0.0019 | 1.9 | 9.0 |
| pfu_aug2.0_101.1_03619.t1 | 4 | 2 | zf-C2H2 | 660 | 679 | 1.9e-12 | 46.7 | 0.00054 | 0.53 | 10.7 |
| pfu_aug2.0_101.1_03619.t1 | 4 | 3 | zf-C2H2 | 685 | 707 | 1.9e-12 | 46.7 | 0.00036 | 0.36 | 11.2 |
| pfu_aug2.0_101.1_03619.t1 | 4 | 3 | zf-C2H2_4 | 685 | 707 | 1.1e-12 | 47.3 | 1.1e-05 | 0.011 | 16.0 |
| pfu_aug2.0_101.1_03619.t1 | 4 | 4 | zf-C2H2_4 | 713 | 735 | 1.1e-12 | 47.3 | 1.9e-07 | 0.00019 | 21.5 |
| pfu_aug2.0_101.1_03619.t1 | 4 | 4 | zf-C2H2 | 714 | 735 | 1.9e-12 | 46.7 | 7.3e-09 | 7.2e-06 | 26.0 |
Transcript
| Transcript ID | pfu_aug2.0_101.1_03619.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03619.t1 atgaattatcagaaagtgtacatcaaccaagtatcgtctacatccacaatggactatctgacacagatgtggaggaacca gctactatgtgatgccgtcataaagacaggtgatatagtcacaaaggcccatagagtggtattaatagctgcatgtccaa tgctacagaacatggagaatgcatcgctgggttcacatctagaggtccgtatggcagcagacatcaaacaagattctgtc aatgcattcctacaatatatatatgaaggatatataatgctaacagaggaaaactgtaaagacattgagaaaatggcaaa acttctacaagttgaaagtcttttgaattgttgtacaaacttctacaaaaacttgagtgagaagactggcagacagcatg gaggtcctatgataaatgttaagcaaggattgaatttccaacacctcaaattttcaaatatacagaagacactttcagaa actgctttgaagagaggaggttcaagtgaggaagtaacgccaggaaataagagacaaaaattcccttcagaagcagaaaa agaaagagttccttctcatgattggaattctgttagtaaaacaaacagttcagagcaatcaaacaccgtaaatcttgttc aagagaacttagaagtaatacatactgatccagctgcaagagatgaagaaggctggcccagatgggcctcaggacctggt gtgtcacactcacatacaatatctgtgtctagtcaacataaggtgcaaagtaacacacaggtagttacaatacctgatga cgacagtggtgattcagttaacactaataaatctgttcatagtgctgtgaccaatcttaatcacaggtcattaacaagtc agagtaacatacatgtgccatcgttttctacacataattctagtctgtttgtgccccagtcagtttcttacatgtcaaca catgcatctgtaactaacagagactcacctacttgtagcagagattcatcgaacaggagtgattatatacctatgacttt agagcatcaacatattcctcaatctcagtcagtgcaaccttcatcacaaattccttatgccgcaggcagtgaaaggcagc aaagaagtgaaaggcagcagatttatgtagcacctctgtccgagttgcccagatcagaaaatttcaaagtggaagagcat gcgtctgataggactactgtgaatgatgatagaccaacccaaatctcagaacagaagaattcagagtacattgacaatag ccatattgacagtcagaaagtatcagaacttctatctggggacactggacaacaaagtaacataagtatgaagactatag acttgaccaatgtgaagacagaggaagatgaaacaggtggtctagaactttctgttgatcagtgtcatactgtagatgag aatatagacgattatgacaatgatgaagaagatgatatttcttatgaacaagaggatatatcagggaggactgaggaagg ttctttaccaggtcatagtgtggaaggacctcatcagcaaacagggcaagatccacaattaacggctaatagaaatttga agaatctgcatatgaagactatagacttgacgtcggtgaagaccgaggaagatgaaacaggtggtctagaactttctgta gatcaatgtcatactgtagatgagaatatagacgattatgacaatgacgaagaagatgatatttcttatgaacaagagga tatatcagggaggactgaggaaggttctttaccaggtcatagtgtggagggacctcatcagcaaacaggacaagatccac aattaacgggttctatcgggaacaaagacggaactgcattcactgataccacttgtccaagatgtaaaaccaactttgaa actccagctcttctaaaggaacatttccagtctgtccatgatgtttacgccatctgtaaatgtggtcgagcttttaaaac cccctactcctacagctatcattataaagtgaaacacagagagaaaaaagtgttctcttgtcctatttgtggagtgacgt cagtttatttctccagcatgaagcgacatcttgcaaaacattcagacactagtcgatggtcttgtcatatttgtggaaaa tcatatagcagaaaagacagtctcaagtcacacatgacaagtcactcggttgatgtacaaaacgttgaccaagacatcat cagtcaaatgacttcacagacaagtttgtcttcaactttgagccatggtggtggattcatgatagtgccccagccttcaa attctgataactcagaaaatctagaatcgacaccttga |
|
Protein
| Protein ID | pfu_aug2.0_101.1_03619.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03619.t1 MNYQKVYINQVSSTSTMDYLTQMWRNQLLCDAVIKTGDIVTKAHRVVLIAACPMLQNMENASLGSHLEVRMAADIKQDSV NAFLQYIYEGYIMLTEENCKDIEKMAKLLQVESLLNCCTNFYKNLSEKTGRQHGGPMINVKQGLNFQHLKFSNIQKTLSE TALKRGGSSEEVTPGNKRQKFPSEAEKERVPSHDWNSVSKTNSSEQSNTVNLVQENLEVIHTDPAARDEEGWPRWASGPG VSHSHTISVSSQHKVQSNTQVVTIPDDDSGDSVNTNKSVHSAVTNLNHRSLTSQSNIHVPSFSTHNSSLFVPQSVSYMST HASVTNRDSPTCSRDSSNRSDYIPMTLEHQHIPQSQSVQPSSQIPYAAGSERQQRSERQQIYVAPLSELPRSENFKVEEH ASDRTTVNDDRPTQISEQKNSEYIDNSHIDSQKVSELLSGDTGQQSNISMKTIDLTNVKTEEDETGGLELSVDQCHTVDE NIDDYDNDEEDDISYEQEDISGRTEEGSLPGHSVEGPHQQTGQDPQLTANRNLKNLHMKTIDLTSVKTEEDETGGLELSV DQCHTVDENIDDYDNDEEDDISYEQEDISGRTEEGSLPGHSVEGPHQQTGQDPQLTGSIGNKDGTAFTDTTCPRCKTNFE TPALLKEHFQSVHDVYAICKCGRAFKTPYSYSYHYKVKHREKKVFSCPICGVTSVYFSSMKRHLAKHSDTSRWSCHICGK SYSRKDSLKSHMTSHSVDVQNVDQDIISQMTSQTSLSSTLSHGGGFMIVPQPSNSDNSENLESTP |
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