Gene
| Gene Model ID | pfu_aug2.0_101.1_03620 |
|---|---|
| Locus | scaffold101.1 : 356098 ... 385739 : - |
| To GenomeBrowser | scaffold101.1:356098..385739 |
| Genes list of scaffold | scaffold101.1 |
| Synonym | pfu_aug1.0_3775.1_16192 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_101.1_03620.t1 | 1 | 1 | RVT_1 | 44 | 163 | 9.5e-23 | 80.6 | 8.1e-26 | 1.5e-22 | 80.0 |
| pfu_aug2.0_101.1_03620.t1 | 1 | 1 | Frag1 | 177 | 370 | 9.4e-24 | 84.0 | 6.8e-27 | 1.3e-23 | 83.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_101.1_03620.t1 | gi|585700827|ref|XP_006822764.1| | PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like, partial [Saccoglossus kowalevskii] | 7.0e-30 |
| pfu_aug2.0_101.1_03620.t1 | gi|676447807|ref|XP_009051529.1| | hypothetical protein LOTGIDRAFT_228276 [Lottia gigantea] | 1.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_101.1_03620.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03620.t1 atgatttggtctccgtcagcttgcaagaaagtatatttggatgtctttatggtccacatacttgatgaaaatgcagagtt tacaacctgttttgacatgtttgaattcggaaaagatatgtatggaaaattccttctgtcggcgaaatcactgtatgagg aaacaagatgtgcagtaaaacttaacaatgaaatgacaagtttcttctctgtggaccagggcgtgaagcaaggctgtaag gtctcgcccaccatgttcgcaatctacgtcaatgatctggcgaatgacgtaaacgcattaaactgtggtgtgacgttcga taactctcagctttcgatattgctatatgcggacgacattgcgttgatctctccagatgaacactcacttcagcgcatgt tagatgttgtacatacatggtgccgtaaatggagaatgacggtgaataaagacaagacaaacattgttcattttcgtgtg acgggtactactagatcatcgcactcgtttcattgtggggatatagcattatctaaaacgggaactgatgtaccagagag gggtgtgttcacagcaatggttaccataacagcactagcgatggcaatgaatgcagaaatcagatttcaatacgtcagac tagtcatgggtcagatgtcacttacacccaaagaaaaaagacggtggatgtctgccaattcattggctttgtaccttagc attgtcgcagctattggtcttctcttggttgcaagttttcaggtggacgtgatgaacgtaccgcattatttgggtgcctt ttgtacatttgtgtttggtgtgattgcgtgctggatccattgtgctataacctacaaattatacaaagaggaacgtgtca cagagtacatcgtcaccagtatcttccagatcatcatcagctttatttccagtgttcttttctttactttttgtggtaca tttggggcatacagacataaaagagatgctggattgggcactaaagagggcgctctcagagaaatatatctttctgcgtc catatcagaatggctgttggccatttccgtggtggcatttgtattaacttttataccagggttcaggaaaatggagtttg acggtatcaacgtgaaatggaaatcaccgggttccagcagtaaaacgggaatatgtgagagagcgtgcagctgttgtcga tga |
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Protein
| Protein ID | pfu_aug2.0_101.1_03620.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03620.t1 MIWSPSACKKVYLDVFMVHILDENAEFTTCFDMFEFGKDMYGKFLLSAKSLYEETRCAVKLNNEMTSFFSVDQGVKQGCK VSPTMFAIYVNDLANDVNALNCGVTFDNSQLSILLYADDIALISPDEHSLQRMLDVVHTWCRKWRMTVNKDKTNIVHFRV TGTTRSSHSFHCGDIALSKTGTDVPERGVFTAMVTITALAMAMNAEIRFQYVRLVMGQMSLTPKEKRRWMSANSLALYLS IVAAIGLLLVASFQVDVMNVPHYLGAFCTFVFGVIACWIHCAITYKLYKEERVTEYIVTSIFQIIISFISSVLFFTFCGT FGAYRHKRDAGLGTKEGALREIYLSASISEWLLAISVVAFVLTFIPGFRKMEFDGINVKWKSPGSSSKTGICERACSCCR |
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