Gene
| Gene Model ID | pfu_aug2.0_101.1_03621 |
|---|---|
| Locus | scaffold101.1 : 390797 ... 401159 : - |
| To GenomeBrowser | scaffold101.1:390797..401159 |
| Genes list of scaffold | scaffold101.1 |
| Synonym | pfu_aug1.0_3775.1_16191 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcription initiation factor tfiid subunit 8 isoform x1 | GO:0005515 GO:0005669 GO:0045598 GO:0045893 GO:0048471 GO:0051457 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_101.1_03621.t1 | 1 | 1 | TAF8_C | 79 | 129 | 6.5e-20 | 70.9 | 1.9e-23 | 1.4e-19 | 69.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_101.1_03621.t1 | gi|676455346|ref|XP_009053975.1| | hypothetical protein LOTGIDRAFT_206383 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_101.1_03621.t1 | gi|524880715|ref|XP_005097018.1| | PREDICTED: transcription initiation factor TFIID subunit 8-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_101.1_03621.t1 | gi|697493327|ref|XP_009676781.1| | PREDICTED: transcription initiation factor TFIID subunit 8, partial [Struthio camelus australis] | 0.0 |
| pfu_aug2.0_101.1_03621.t1 | gi|640808475|ref|XP_008060767.1| | PREDICTED: transcription initiation factor TFIID subunit 8 isoform X1 [Tarsius syrichta] | 0.0 |
| pfu_aug2.0_101.1_03621.t1 | gi|640808477|ref|XP_008060768.1| | PREDICTED: transcription initiation factor TFIID subunit 8 isoform X2 [Tarsius syrichta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_101.1_03621.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03621.t1 atgcctgatctgacagagctaggaaagtgttcccagggatatgctgagcttgcagggagaactgaagctatggtcactga tgtcctcatggctcaagttgacatggggcagaatgttaacgagataccaatacatgcgaagaggcccaacaagtctgttt ttctaccaccttcacatagccagcagccacaaactttgaagacattacaagcaggagagcgagcctcccacccatcccat atacctgatcatctacctcccttccctgatcctcatacatacgtcagaacattgacaaacaaggctcctgtaaatgagta tcagataataagggatagagctgcttcacagaaacgagatgtagagagggccttaactaggttcatagccaagactgggg agacacagtcccttttcagggacgacacatcttcatttccattaatagctgttaagcccacacctctgccctaccttaat gccctgctacccaaggatcaggatttggatgcccaggatacaagtgatgcctcccaagctcatgtcaagcaggagaagga ggaagctaaagggtcagactctaccccaggggaaggggggagtggcagtaaggaggagaatgaatcagacacaatagata atccttatttaagaccaatcaaaatatcacggattgtgaagaaaaaaattatagtacatgtacgccatgctccacaaaaa tga |
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Protein
| Protein ID | pfu_aug2.0_101.1_03621.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03621.t1 MPDLTELGKCSQGYAELAGRTEAMVTDVLMAQVDMGQNVNEIPIHAKRPNKSVFLPPSHSQQPQTLKTLQAGERASHPSH IPDHLPPFPDPHTYVRTLTNKAPVNEYQIIRDRAASQKRDVERALTRFIAKTGETQSLFRDDTSSFPLIAVKPTPLPYLN ALLPKDQDLDAQDTSDASQAHVKQEKEEAKGSDSTPGEGGSGSKEENESDTIDNPYLRPIKISRIVKKKIIVHVRHAPQK |
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