Gene
| Gene Model ID | pfu_aug2.0_101.1_03623 |
|---|---|
| Locus | scaffold101.1 : 407470 ... 425702 : + |
| To GenomeBrowser | scaffold101.1:407470..425702 |
| Genes list of scaffold | scaffold101.1 |
| Synonym | pfu_aug1.0_16043.1_61570 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ubiquitin carboxyl-terminal hydrolase 46-like | GO:0006511 GO:0008234 GO:0036459 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_101.1_03623.t1 | 1 | 1 | UCH | 26 | 335 | 0.0 | 205.7 | 0.0 | 0.0 | 205.4 |
| pfu_aug2.0_101.1_03623.t1 | 1 | 1 | UCH_1 | 28 | 324 | 2.1e-32 | 112.7 | 5.2e-36 | 2.6e-32 | 112.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_101.1_03623.t1 | gi|676443846|ref|XP_009050236.1| | hypothetical protein LOTGIDRAFT_238923 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_101.1_03623.t1 | gi|524881807|ref|XP_005097553.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_101.1_03623.t1 | gi|260832998|ref|XP_002611444.1| | hypothetical protein BRAFLDRAFT_63924 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_101.1_03623.t1 | gi|291234105|ref|XP_002736998.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_101.1_03623.t1 | gi|573883805|ref|XP_006630056.1| | PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like isoform X1 [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_101.1_03623.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03623.t1 atgaaagcttatggtaataatgcatctcaactagagaaagagattggctctgaacaacttcctgctaatgaacattactt tggactcataaattttggaaacacttgttactgtaattccgtcctgcaagctttgtatttttgtcgacccttccgagaac gagtgcttcaatttaaacaacatcaaaagaataacaagaaagagacattgctgacatgcctggctgatttgttctatagt atagccacacagaagaagaaagtgggaactatggctcctaagaagttcatcacacgattaaggaaagaatatgagttgtt tgacaactttatgcagcaggatgctcacgagttccttaattatctcctgaacagagtctcagaactgctacaagctgaca agcaaggtaacaaaccaaagaatgggtccaatgaaggtcagagtaaatctgagccaacttgggtagaagatttattccag ggaacgtttaccaatgaaacccgttgcctcaactgtgaaacagtgagcagtaaagacgaggacttcctagatctctccgt agatgttgaacagaacacgtccatcacacactgtctgagggggtttagcagcacagaaacactgtgtgctgaacagaaat actactgtgaagtgtgctgtagtaaacaagaagctcaaaaaaggttagttatatacaattgcaatggagtgatttctgtt cgaagattcattttagctttacatctgaagcggttcaaatacatggagcagatgaatcgttttaccaaattatcatatcg ggttgtgtttccactggagctacgtttatttaatacttctgatgacgcatgtaatcctgatcgtatgtatgatttggttg ccgtggtgatacatataggaagcagtttaaatagaggccattatatcagcatcgtcaaaagtgacggcttctggcttctg tttgatgatgatattgtagataaaatagactctagtgctatagaggatttttatggactgccatctgacttacagaagaa ctcagagactgggaatgataatttatcatga |
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Protein
| Protein ID | pfu_aug2.0_101.1_03623.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03623.t1 MKAYGNNASQLEKEIGSEQLPANEHYFGLINFGNTCYCNSVLQALYFCRPFRERVLQFKQHQKNNKKETLLTCLADLFYS IATQKKKVGTMAPKKFITRLRKEYELFDNFMQQDAHEFLNYLLNRVSELLQADKQGNKPKNGSNEGQSKSEPTWVEDLFQ GTFTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRGFSSTETLCAEQKYYCEVCCSKQEAQKRLVIYNCNGVISV RRFILALHLKRFKYMEQMNRFTKLSYRVVFPLELRLFNTSDDACNPDRMYDLVAVVIHIGSSLNRGHYISIVKSDGFWLL FDDDIVDKIDSSAIEDFYGLPSDLQKNSETGNDNLS |
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