Gene
| Gene Model ID | pfu_aug2.0_101.1_03628 |
|---|---|
| Locus | scaffold101.1 : 498020 ... 508249 : - |
| To GenomeBrowser | scaffold101.1:498020..508249 |
| Genes list of scaffold | scaffold101.1 |
| Synonym | pfu_aug1.0_39476.1_12374 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribosomal rna-processing protein 8 | GO:0005634 GO:0007154 GO:0008152 GO:0044446 GO:0050794 GO:0051716 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_101.1_03628.t1 | 1 | 1 | Methyltransf_8 | 21 | 131 | 7.8e-37 | 127.0 | 1.90001e-40 | 9.5e-37 | 126.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_101.1_03628.t1 | gi|544487825|ref|XP_005578839.1| | PREDICTED: ribosomal RNA-processing protein 8 [Macaca fascicularis] | 9.0e-34 |
| pfu_aug2.0_101.1_03628.t1 | gi|402894362|ref|XP_003910332.1| | PREDICTED: ribosomal RNA-processing protein 8 isoform X1 [Papio anubis] | 1.0e-33 |
| pfu_aug2.0_101.1_03628.t1 | gi|635015588|ref|XP_008006647.1| | PREDICTED: ribosomal RNA-processing protein 8 [Chlorocebus sabaeus] | 1.0e-33 |
| pfu_aug2.0_101.1_03628.t1 | gi|297268533|ref|XP_001100895.2| | PREDICTED: ribosomal RNA-processing protein 8-like [Macaca mulatta] | 1.0e-33 |
| pfu_aug2.0_101.1_03628.t1 | gi|641735064|ref|XP_008158064.1| | PREDICTED: ribosomal RNA-processing protein 8 [Eptesicus fuscus] | 3.0e-33 |
Transcript
| Transcript ID | pfu_aug2.0_101.1_03628.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03628.t1 atgctcaatgttaaagtttttgagaagtacgtgaaaagtcaaggttatagtcatgaggtcaaaaattttggtatcaatgg aaaggttcccttatcaaacagtacagtagatgtagccgttttctgtctgtcattgatgggtaccaaccttaaagactacc tgacagaagccaatagagtactcaagaaaaatggtactatgaaggtggcagaggttagcagtagatttaacagtgtccct agatttcttcttactgtggagaagtttggtttcaagctcacctctcaggatgacagcaacaagatgtttatcatgttgaa ctttaagaagactggactcccaaagacaggtgccccggatttcaaactccacccatgtgtttacaagaaaagataa |
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Protein
| Protein ID | pfu_aug2.0_101.1_03628.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_101.1_03628.t1 MLNVKVFEKYVKSQGYSHEVKNFGINGKVPLSNSTVDVAVFCLSLMGTNLKDYLTEANRVLKKNGTMKVAEVSSRFNSVP RFLLTVEKFGFKLTSQDDSNKMFIMLNFKKTGLPKTGAPDFKLHPCVYKKR |
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