Gene
| Gene Model ID | pfu_aug2.0_1012.1_08093 |
|---|---|
| Locus | scaffold1012.1 : 140760 ... 151645 : - |
| To GenomeBrowser | scaffold1012.1:140760..151645 |
| Genes list of scaffold | scaffold1012.1 |
| Synonym | pfu_aug1.0_4202.1_44892 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1012.1_08093.t1 | 3 | 1 | TPR_11 | 235 | 305 | 4.6e-07 | 29.3 | 8.9e-06 | 0.022 | 14.4 |
| pfu_aug2.0_1012.1_08093.t1 | 3 | 2 | TPR_11 | 295 | 315 | 4.6e-07 | 29.3 | 0.0061 | 15.0 | 5.3 |
| pfu_aug2.0_1012.1_08093.t1 | 3 | 3 | TPR_11 | 345 | 388 | 4.6e-07 | 29.3 | 8.1e-05 | 0.2 | 11.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1012.1_08093.t1 | gi|676491966|ref|XP_009065766.1| | hypothetical protein LOTGIDRAFT_236543 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1012.1_08093.t1 | gi|585723253|ref|XP_006813610.1| | PREDICTED: regulator of microtubule dynamics protein 3-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1012.1_08093.t1 | gi|198433680|ref|XP_002129260.1| | PREDICTED: regulator of microtubule dynamics protein 3 [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_1012.1_08093.t1 | gi|260803826|ref|XP_002596790.1| | hypothetical protein BRAFLDRAFT_120481 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1012.1_08093.t1 | gi|391344796|ref|XP_003746681.1| | PREDICTED: regulator of microtubule dynamics protein 2-like [Metaseiulus occidentalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1012.1_08093.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1012.1_08093.t1 atgtcgctgacgtcggcgataatcggtacaatactacttacacacgttcgactgcggtactatatcctcctgcaactaga tgatgatgatgatgatgataatgatgataataatgatgatgatgatgatgatgatcatggggatggtggtcacagtggtg atggtggcggtggtgatggtggtggtgatgatgatggtggtggtaatgatgatgatgatgatgatgatgatgatgatgat gatgattatgatgacaacgacgacaattatgacgacaacgatgatgatggtcgtgttggtggtggtggtggaagaaacgt caagggtgagtcatcattgacatgtgcactggttatgtgtacatttgactttcatcaagttacggacaaagatgatacga aaacgttcgagcattgttacgtacagtctaccattttcatgacgtcacaatgatccagtgattttgaaaacctaaatgac gagcagacggagctacataccaaaataaacagtgacatagcccctacaccacaggtagagaaagaaatattcccagaagt ggacatattactagaaggcagagatgaggataaattcaaagcataccagctgcttgattcaaacaggatcaagtttgaaa aagatgtagagttttactggagattagctaagacctcataccaggtatcacagatagagggcgccaggggtaacaaggag agacagaaggagctagtctacgcagctatggatgcagctacaaaagctgtggacattgacgaagcttgtgctaatgctca taaatggtatgccatcacactgggaagtataggtgattatgagggaactcaggctaaaatcaaaaatggatatactttta aggaacacatcgagcgtgccatagaattaaatcccaccgacccatcaaatcatcatttactgggaagatggtgctatggg gtgtacatgctgtcatggatagagaggaaggctgcagcgactctgtatgcagcaccgccttcttcaacagctgatgaggc attgaaacatttcttggaggctgaacgattaagacctgagaaatggaaagaaaacatcttatttattggaaagtgttata tacagcaatcaaagtacaaagagactgtagagtggctagagaaaggtcaagctatccctgttataagtcaagatgataaa acgtctcaggaggaaatcctgtctttactgcagaaatacagaggatattaa |
|
Protein
| Protein ID | pfu_aug2.0_1012.1_08093.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1012.1_08093.t1 MSLTSAIIGTILLTHVRLRYYILLQLDDDDDDDNDDNNDDDDDDDHGDGGHSGDGGGGDGGGDDDGGGNDDDDDDDDDDD DDYDDNDDNYDDNDDDGRVGGGGGRNVKGESSLTCALVMCTFDFHQVTDKDDTKTFEHCYVQSTIFMTSQXSSDFENLND EQTELHTKINSDIAPTPQVEKEIFPEVDILLEGRDEDKFKAYQLLDSNRIKFEKDVEFYWRLAKTSYQVSQIEGARGNKE RQKELVYAAMDAATKAVDIDEACANAHKWYAITLGSIGDYEGTQAKIKNGYTFKEHIERAIELNPTDPSNHHLLGRWCYG VYMLSWIERKAAATLYAAPPSSTADEALKHFLEAERLRPEKWKENILFIGKCYIQQSKYKETVEWLEKGQAIPVISQDDK TSQEEILSLLQKYRGY |
|