Gene
| Gene Model ID | pfu_aug2.0_1012.1_08096 |
|---|---|
| Locus | scaffold1012.1 : 190015 ... 196127 : - |
| To GenomeBrowser | scaffold1012.1:190015..196127 |
| Genes list of scaffold | scaffold1012.1 |
| Synonym | pfu_aug1.0_4294.1_66935 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1012.1_08096.t1 | 1 | 1 | I-set | 24 | 82 | 3.8e-07 | 29.8 | 2.2e-10 | 8.3e-07 | 28.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1012.1_08096.t1 | gi|260816457|ref|XP_002602987.1| | hypothetical protein BRAFLDRAFT_84722 [Branchiostoma floridae] | 5.0e-14 |
| pfu_aug2.0_1012.1_08096.t1 | gi|524867571|ref|XP_005090596.1| | PREDICTED: uncharacterized protein LOC101859375 [Aplysia californica] | 1.0e-12 |
| pfu_aug2.0_1012.1_08096.t1 | gi|658875874|ref|XP_008420942.1| | PREDICTED: uncharacterized protein LOC103472863 [Poecilia reticulata] | 3.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_1012.1_08096.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1012.1_08096.t1 atgggcaagtacaaatatcagaatgctttagttgaaataatcagctgtcagttggttgagagtttatgtgttccggaacc aatgattacttggaaaagaaatgaaaaagaaatacgaagagacggaatatttaagcttagaaagtgtggctccaatgtgt ccctgaaaataactgacaaaaaagaatttaaaggaacttttacctgtgtcgcagaaaataccgtaggaactaccaaagtg caaattgaatcagaagatgctgtacaaagtggagggaaaggaagaataccaataccaaccacatcagtatcagaaaaaga aaggaaatattggaaaatgaggatcgacgatattctcaatttcaagaaaaacgagctcacagtaacggaacaggatgatc tgagtgcaaaactcaaggatttgcgcaacaaagtgtttttcggattcattcttataaatgcgatatattttactttcgtc ttcacccttacgcaagccgacgctacattcaaccaggtatcatttgaaattccatgtcctgatacagctggcgtgttgag gttaaatccaattctcattgcctttattttgacatttggaatcgtgttattgatacagttctggggaatgatataccata gattgtccacttttgtacatattatcctttctgtcaagttagactttaagagatctaaaatcgggcccgagaattcaccg caggtaacaagccaagggccccatgacagttcacagatagcaggagacacagtacatggacaccaggaccaccttcaagg accatccgatcaagtaacccaggacgcaagtcaagaatcgcatgcaacgcaacaggaaccaccagacaatctaaataagt ccttaaagtctcaaatccttataaaagataaagggagtgcttggatgatggctaaatcgaaaatgaccttcattacgtcc ttcagaaaaaaagacggagatgttgagcaaatgagtgaacaaactctcaagaaatcctag |
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Protein
| Protein ID | pfu_aug2.0_1012.1_08096.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1012.1_08096.t1 MGKYKYQNALVEIISCQLVESLCVPEPMITWKRNEKEIRRDGIFKLRKCGSNVSLKITDKKEFKGTFTCVAENTVGTTKV QIESEDAVQSGGKGRIPIPTTSVSEKERKYWKMRIDDILNFKKNELTVTEQDDLSAKLKDLRNKVFFGFILINAIYFTFV FTLTQADATFNQVSFEIPCPDTAGVLRLNPILIAFILTFGIVLLIQFWGMIYHRLSTFVHIILSVKLDFKRSKIGPENSP QVTSQGPHDSSQIAGDTVHGHQDHLQGPSDQVTQDASQESHATQQEPPDNLNKSLKSQILIKDKGSAWMMAKSKMTFITS FRKKDGDVEQMSEQTLKKS |
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