Gene
| Gene Model ID | pfu_aug2.0_1013.1_11381 |
|---|---|
| Locus | scaffold1013.1 : 78246 ... 97312 : + |
| To GenomeBrowser | scaffold1013.1:78246..97312 |
| Genes list of scaffold | scaffold1013.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1013.1_11381.t1 | 2 | 1 | TNFR_c6 | 33 | 56 | 2.5e-06 | 27.4 | 2.4e-05 | 0.12 | 12.4 |
| pfu_aug2.0_1013.1_11381.t1 | 2 | 2 | TNFR_c6 | 85 | 123 | 2.5e-06 | 27.4 | 1.0e-07 | 0.0005 | 20.0 |
Transcript
| Transcript ID | pfu_aug2.0_1013.1_11381.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1013.1_11381.t1 atgcatcaaagaaagaccaccatgatgatgctcgtaactatccatgctgttttaactatggaggcggcggttaacgcttt gatgtgcagggcagaggatcatgtatactatcatgagcagctcggaggatgtctcaattgcgagccctgcaacccgggag aggagcagatggacatacagaaatgggcgtcctcaaaaccattaagtatattcacaatatatggccctacacagtgtcca acatgtattacttgccgagaaggattctttaattctgaaagagcgttccattgtacaagatgtaagaactgcacacttca taataaacacgaagttgaacaatgttcctctatctctgatgcaaagtgtgatggtgtattgatagataagaggtcagatg cctctacaaagcttgaaacatatacaggcaatgttagtgaagctggaacgaacacctggcccattgttgctatatttggt cttactttaagtgtgcttattgtaggatttcttggtacccgaacactctacaaacgatatatgaaaaatcgaaggaacac gatcttacgagctgaggagggtagtacaacaccccttatgcaagatagaaggtattccatgggcagacgaaaacgacata attctgagccttcatacaccaactcaacggagagtgttaaacccctacagcgacagtcctcgtatcctggtgaaagatgc ataattgatatagaaacagatttgccaaaggaattagtatcaaaagatgagaaggtagataaggacttcttgatattgct ttcacaactgttgtgtgagaattcacactgcatcacctttgcccggagattaggactctcggatgtaaagattcacacta tcaaacacgatcatgacagagatggactcatggaagtatcctaccaaataatggctgccttacagaaaaatgggattctt tctcataaaagagaagctatccaaactctcaaggacatgggtctttctcatatcctacaacaactatgtcgttgccaaga ttaa |
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Protein
| Protein ID | pfu_aug2.0_1013.1_11381.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1013.1_11381.t1 MHQRKTTMMMLVTIHAVLTMEAAVNALMCRAEDHVYYHEQLGGCLNCEPCNPGEEQMDIQKWASSKPLSIFTIYGPTQCP TCITCREGFFNSERAFHCTRCKNCTLHNKHEVEQCSSISDAKCDGVLIDKRSDASTKLETYTGNVSEAGTNTWPIVAIFG LTLSVLIVGFLGTRTLYKRYMKNRRNTILRAEEGSTTPLMQDRRYSMGRRKRHNSEPSYTNSTESVKPLQRQSSYPGERC IIDIETDLPKELVSKDEKVDKDFLILLSQLLCENSHCITFARRLGLSDVKIHTIKHDHDRDGLMEVSYQIMAALQKNGIL SHKREAIQTLKDMGLSHILQQLCRCQD |
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