Gene
| Gene Model ID | pfu_aug2.0_1015.1_18018 |
|---|---|
| Locus | scaffold1015.1 : 4129 ... 5612 : + |
| To GenomeBrowser | scaffold1015.1:4129..5612 |
| Genes list of scaffold | scaffold1015.1 |
| Synonym | pfu_aug1.0_170794.1_50017 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1015.1_18018.t1 | 1 | 1 | DNA_pol_B_2 | 106 | 155 | 2.4e-11 | 42.9 | 2.2e-15 | 3.3e-11 | 42.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1015.1_18018.t1 | gi|641649900|ref|XP_008187431.1| | PREDICTED: uncharacterized protein LOC103310553 [Acyrthosiphon pisum] | 2.0e-27 |
| pfu_aug2.0_1015.1_18018.t1 | gi|308484685|ref|XP_003104542.1| | hypothetical protein CRE_23329 [Caenorhabditis remanei] | 2.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_1015.1_18018.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1015.1_18018.t1 atgaagatagcccacctgtccatcgacggctacaacatgaacatgcagaccgtctacgtgttctacggttgcttttggca cgggtgtcccgaatgctaccccaacatgaaattggaggaacatccggtcagacacgactgcaccttccagcaactgtacc aagccacccaggaccgccaaaactttttgaacgagttgggctttagagtggaacacatttgggaacatgattacgatcgc cgatgtaaggaggatccggaattcggagcgttcgccaagaaaatggccgaggaattcgtggaccccttacaacacagaga tgctttatttggcggtagaactaatgccactagactctaccgtgacgaaggagacatgcgttacatcgatgtctgttccc tctacccctctgttctaaaaaacgggactttccctatcggacatccggttctgattactgagaactttgatgatatagat aatggctcgccttgtttaactccagattga |
|
Protein
| Protein ID | pfu_aug2.0_1015.1_18018.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1015.1_18018.t1 MKIAHLSIDGYNMNMQTVYVFYGCFWHGCPECYPNMKLEEHPVRHDCTFQQLYQATQDRQNFLNELGFRVEHIWEHDYDR RCKEDPEFGAFAKKMAEEFVDPLQHRDALFGGRTNATRLYRDEGDMRYIDVCSLYPSVLKNGTFPIGHPVLITENFDDID NGSPCLTPD |
|