Gene
| Gene Model ID | pfu_aug2.0_1017.1_24616 |
|---|---|
| Locus | scaffold1017.1 : 146670 ... 161345 : - |
| To GenomeBrowser | scaffold1017.1:146670..161345 |
| Genes list of scaffold | scaffold1017.1 |
| Synonym | pfu_aug1.0_3904.1_66820 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tricarboxylate transport mitochondrial | GO:0005371 GO:0005811 GO:0006843 GO:0016006 GO:0016021 GO:0031966 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1017.1_24616.t1 | 3 | 1 | Mito_carr | 35 | 124 | 0.0 | 169.4 | 1.7e-26 | 2.5e-22 | 78.3 |
| pfu_aug2.0_1017.1_24616.t1 | 3 | 2 | Mito_carr | 135 | 220 | 0.0 | 169.4 | 5.8e-19 | 8.6e-15 | 54.2 |
| pfu_aug2.0_1017.1_24616.t1 | 3 | 3 | Mito_carr | 235 | 276 | 0.0 | 169.4 | 9.8e-13 | 1.5e-08 | 34.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1017.1_24616.t1 | gi|91084971|ref|XP_972074.1| | PREDICTED: putative tricarboxylate transport protein, mitochondrial [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_1017.1_24616.t1 | gi|195329824|ref|XP_002031610.1| | GM26094 [Drosophila sechellia] | 0.0 |
| pfu_aug2.0_1017.1_24616.t1 | gi|195571727|ref|XP_002103854.1| | GD20656 [Drosophila simulans] | 0.0 |
| pfu_aug2.0_1017.1_24616.t1 | gi|242025180|ref|XP_002433004.1| | tricarboxylate transport protein, putative [Pediculus humanus corporis] | 0.0 |
| pfu_aug2.0_1017.1_24616.t1 | gi|78706744|ref|NP_001027175.1| | scheggia, isoform E [Drosophila melanogaster] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1017.1_24616.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1017.1_24616.t1 atggacagtgataattctggaagtaaatttacaagtaggcctggtgctagtttcatggctgcagcgccaggccctcatgg atgggcatatttcaaccagtcaatgaagagcgtcgtttcaggtggtattacgggaggtattgagattatgatcacgtttc ccacagaatatgtaaagactcagttacaactagacgagaggtcgggtatggcccgccgctatacaggagtagctaattgt atcagtgtgacataccatgaatttggttttagaggactatacaagggtcttagtgtgcttctatacggatctataccaaa gtcagccgtaaggtttggtgcatttgaaacattcaaaagttatactgtagatgaaaaaggcaatttagccccaaaatgga gggtattgtgtggtctgggtgctggagtttctgaggcaatattagctgtaacatggatggagacggtcaaggtcaaattt ataaatgatcaaacatcagcgaatcctcgtttccgaaattttagtcatggtgttagttgtatactaaaagaacacggtat ccgtggtgtttatcaaggacttgttccaacaatcatgaaacagggcagtaatcaagctataaggttttatgtcatggaat cgcttaaacattggtatagaggaggtgatcctaccaagccggtaccgacgtgggtaataggtggttttggagctttagcc ggtgccgcgtctgtatttgggaatacacctatagatgtcatcaaaacaagattacagggattggacgctcctaaatataa aggaacattccattgttttacaagggtaccgtacctagacttggtagagtgtgtctag |
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Protein
| Protein ID | pfu_aug2.0_1017.1_24616.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1017.1_24616.t1 MDSDNSGSKFTSRPGASFMAAAPGPHGWAYFNQSMKSVVSGGITGGIEIMITFPTEYVKTQLQLDERSGMARRYTGVANC ISVTYHEFGFRGLYKGLSVLLYGSIPKSAVRFGAFETFKSYTVDEKGNLAPKWRVLCGLGAGVSEAILAVTWMETVKVKF INDQTSANPRFRNFSHGVSCILKEHGIRGVYQGLVPTIMKQGSNQAIRFYVMESLKHWYRGGDPTKPVPTWVIGGFGALA GAASVFGNTPIDVIKTRLQGLDAPKYKGTFHCFTRVPYLDLVECV |
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