Gene
| Gene Model ID | pfu_aug2.0_1018.1_27984 |
|---|---|
| Locus | scaffold1018.1 : 125356 ... 146025 : - |
| To GenomeBrowser | scaffold1018.1:125356..146025 |
| Genes list of scaffold | scaffold1018.1 |
| Synonym | pfu_aug1.0_19863.1_61946 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1018.1_27984.t1 | 3 | 1 | Gal-bind_lectin | 16 | 141 | 0.0 | 269.8 | 1.8e-33 | 1.3e-29 | 102.2 |
| pfu_aug2.0_1018.1_27984.t1 | 3 | 2 | Gal-bind_lectin | 149 | 277 | 0.0 | 269.8 | 6.7e-31 | 5.0e-27 | 93.8 |
| pfu_aug2.0_1018.1_27984.t1 | 3 | 3 | Gal-bind_lectin | 286 | 381 | 0.0 | 269.8 | 9.3e-24 | 6.9e-20 | 70.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1018.1_27984.t1 | gi|410910502|ref|XP_003968729.1| | 1.4013e-45 | |
| pfu_aug2.0_1018.1_27984.t1 | gi|187607744|ref|NP_001120550.1| | lectin, galactoside-binding, soluble, 9 [Xenopus (Silurana) tropicalis] | 9.00054e-42 |
Transcript
| Transcript ID | pfu_aug2.0_1018.1_27984.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1018.1_27984.t1 atgaggattacctaccaggctaaagaccaggacgacagtgcggcatatcgcattccaaatggtctacgtgtaggaaccca ggttctcctgagggggagagtccaggagggatgtgaagcctttgcagtcaatctccagcaggaggagggaggtggcgaca ttgcactccactttaacccccgaccaagtgaaggcatcgtcgttcggaactgctatgctggggactggcagagcgaggaa agagaccaaccacactttccttttgactgtggaagatctttcctcctgcgtatagaggcggcaggagatggtttccgaac atacgtcaatggcaaaccctatatcgacttcggacacaggatgggcatggatcatatcagatatctgttcttatcatcag gagccgagttttatgacatcaccatccaagatcgctataggttgccatacagtgctgagattcccgggggtatgagtcca ggcaaggctatcagggtccggggagctggtcaggataatgatgggttcagtctgaacttcagctgtgatccaagtaacga gcggtgtgccttccatttcaatccccgccctaacgaaggtgtggttatccggaacgcctgtctcgatggatggggaggag aagagagggattatgaagcagatttccccttcagtcctttccagtattttgatgctgtcctagttgccaatgacgataaa tatattgtatttgtgaatgatgagtactttgcagaattcaatcacagatgtgacgtccatgaatgtaatttcttcaacat ccgcgggaacatggatatcctagacgtcagcctgtttgaacctatgggtgacgagtttgtaaagagagtcccatcaggat tggagaaaggagataacatagtactccgaggttttgcaaggccagggtggacacgatttgctattaacttcatgaacggt gatagcccggatgacgacatagctttccactggaatccacgtatggacgagggctgcgtggtcatgaactgtaaaatggg tggagactgggaaaacgaggaacgggaggagatgcctccatgttttggagatggtaaaccgtttgaaatcaagattgtaa ctaaaaggaacaaatttaaggtaataagaatgtga |
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Protein
| Protein ID | pfu_aug2.0_1018.1_27984.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1018.1_27984.t1 MRITYQAKDQDDSAAYRIPNGLRVGTQVLLRGRVQEGCEAFAVNLQQEEGGGDIALHFNPRPSEGIVVRNCYAGDWQSEE RDQPHFPFDCGRSFLLRIEAAGDGFRTYVNGKPYIDFGHRMGMDHIRYLFLSSGAEFYDITIQDRYRLPYSAEIPGGMSP GKAIRVRGAGQDNDGFSLNFSCDPSNERCAFHFNPRPNEGVVIRNACLDGWGGEERDYEADFPFSPFQYFDAVLVANDDK YIVFVNDEYFAEFNHRCDVHECNFFNIRGNMDILDVSLFEPMGDEFVKRVPSGLEKGDNIVLRGFARPGWTRFAINFMNG DSPDDDIAFHWNPRMDEGCVVMNCKMGGDWENEEREEMPPCFGDGKPFEIKIVTKRNKFKVIRM |
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