Gene
| Gene Model ID | pfu_aug2.0_1022.1_08097 |
|---|---|
| Locus | scaffold1022.1 : 45916 ... 78798 : + |
| To GenomeBrowser | scaffold1022.1:45916..78798 |
| Genes list of scaffold | scaffold1022.1 |
| Synonym | pfu_aug1.0_1802.1_51422 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| receptor-type tyrosine-protein phosphatase mu-like isoform x5 | GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1022.1_08097.t1 | 2 | 1 | Y_phosphatase | 88 | 317 | 0.0 | 253.5 | 0.0 | 0.0 | 195.6 |
| pfu_aug2.0_1022.1_08097.t1 | 2 | 2 | Y_phosphatase | 357 | 493 | 0.0 | 253.5 | 3.6e-20 | 5.3e-16 | 58.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1022.1_08097.t1 | gi|676421160|ref|XP_009043780.1| | hypothetical protein LOTGIDRAFT_152052 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1022.1_08097.t1 | gi|260832327|ref|XP_002611109.1| | hypothetical protein BRAFLDRAFT_70467 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1022.1_08097.t1 | gi|734639164|ref|XP_010748356.1| | PREDICTED: receptor-type tyrosine-protein phosphatase mu-like, partial [Larimichthys crocea] | 0.0 |
| pfu_aug2.0_1022.1_08097.t1 | gi|657537994|ref|XP_008275370.1| | PREDICTED: receptor-type tyrosine-protein phosphatase mu isoform X2 [Stegastes partitus] | 0.0 |
| pfu_aug2.0_1022.1_08097.t1 | gi|583994398|ref|XP_006792343.1| | PREDICTED: receptor-type tyrosine-protein phosphatase mu-like isoform X5 [Neolamprologus brichardi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1022.1_08097.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1022.1_08097.t1 atgggtaaaagattattggggactctttcccgtcatatcagcacaattaaagctgcttttggttttgatgatttttcctc agagaaagaagagaaagcggtgtccgcggtcaagaaggatcccatcgctgccgaccagtttttacacagactcaaacaga aaaaatctgacaaacagttcaatatagaagttagggctatagttcgtaaccaagacgagtttccatgcacggtttccatg acacctgacaacgtactgctcaatgtaaaccaggatgtagtcacgtttgaccattccagagttgttcttcgtgatgttcc cagcgaggaagactatacagagtatattaatgctagttatgttgatggaatatacaaagaaaaagaatacatcgccacac aaggtcctcgtcagaagacagttgcttcattttggcacctggcgtggcaagaaaatgtccactgtattgtcatggcaacc ggactttttgaaaatgccaatcaacaatgtgataaatattggggtgacgtatttagtatgcagaaatacgtccgtcacgg cgacatccacatttggctggattccactgtggagatggcgcagctcactatcaggtctttcagaatacaacgtgagggtg taacggaacagaggagagtaaagcattttgagatggtggggttcaacgatgaggccactgaccccgggttcttactggac tgtgtccggagagtccagcagcacatgctgaccgtaccgggtcctatcctcatacactgcaggtgtggagggggtaaaac tgctgtatttatttctgttgattactgcctgaaacagttagagactgacggcaatgttgatgtctacagtaccgtgctcc atctcagaaaattccggaaaaacatggtccgcactctgttccagtaccgccttatatatgacagtgtagctatgcatata cagtgtgggaccactgtggtgccttcagtacaactaccggctctcgcacaaagactctcccttaaagacaccaaaaccag gcagctaggctttgagaaggaatataacgggtattatcaggaaaataatttcctggtcactcaatggcctatgcaacaca ccgtaccagatgtctggcggctcatatacgactataaaattacctctttggtggtgctcaatgactccaagttctctagg aattatccctgcttttggccaagagagctcgatgtagaagagaagtttgggcctataggagtcaaataccttgggagtca caaagttgctcaagttacaatacgggcttttgcagtaagaaagaacataagctgtatgccgattggcgaccttaccaacg aatcaacagtgatcaagatattccagttaaatagctggcccgggagggacaagggaagcttctcctcacggtctctgatc tatctgatgggattcgtggaggaatggcagcagaaaactaaccctctcaacccctcggagtatatatattgctactcttt cattgtatacgtcgtggaattgatgcaagaggacaaacctaaaattgtgataactggtccagcatcgaaagccggacaag tcaatcgtgggtacgacttgttgaacaatcttcactcagaggaagcatccgagctatcagcggcctctgattggagctac gtgacaacactagatctctcccccagcttagacagtactaacctagcagctaggggtcgtattgctaccagtgtgtcgcc ggccactcagttacagatccctactacttcagagaaaatgagtgtttcgtcagcagatagtttatgtgttccagaccgca tggcggattttcaggtggacaatttccgtagaaatgcatcaaatcgcagcagttatggttcgtctcgcagctatgaggaa aataacaatatatttgaaaactcacgtgcgtctgtgactacaatgttcacgagtagctcaacgatggattaccacacgcc ggcaaactcaccaatacgcatgctcaacacgggaagcttccaaggcggactgagtccacgtgggaaagtggacatcagta aatcccgcactcgccgaccaatactaaaacgtcaagacgcagaggaagtggtggagatgaccaagatggacgtggacaat caacgctcccatagtctttcaacggtgaaaaaatcaaacttttaa |
|
Protein
| Protein ID | pfu_aug2.0_1022.1_08097.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1022.1_08097.t1 MGKRLLGTLSRHISTIKAAFGFDDFSSEKEEKAVSAVKKDPIAADQFLHRLKQKKSDKQFNIEVRAIVRNQDEFPCTVSM TPDNVLLNVNQDVVTFDHSRVVLRDVPSEEDYTEYINASYVDGIYKEKEYIATQGPRQKTVASFWHLAWQENVHCIVMAT GLFENANQQCDKYWGDVFSMQKYVRHGDIHIWLDSTVEMAQLTIRSFRIQREGVTEQRRVKHFEMVGFNDEATDPGFLLD CVRRVQQHMLTVPGPILIHCRCGGGKTAVFISVDYCLKQLETDGNVDVYSTVLHLRKFRKNMVRTLFQYRLIYDSVAMHI QCGTTVVPSVQLPALAQRLSLKDTKTRQLGFEKEYNGYYQENNFLVTQWPMQHTVPDVWRLIYDYKITSLVVLNDSKFSR NYPCFWPRELDVEEKFGPIGVKYLGSHKVAQVTIRAFAVRKNISCMPIGDLTNESTVIKIFQLNSWPGRDKGSFSSRSLI YLMGFVEEWQQKTNPLNPSEYIYCYSFIVYVVELMQEDKPKIVITGPASKAGQVNRGYDLLNNLHSEEASELSAASDWSY VTTLDLSPSLDSTNLAARGRIATSVSPATQLQIPTTSEKMSVSSADSLCVPDRMADFQVDNFRRNASNRSSYGSSRSYEE NNNIFENSRASVTTMFTSSSTMDYHTPANSPIRMLNTGSFQGGLSPRGKVDISKSRTRRPILKRQDAEEVVEMTKMDVDN QRSHSLSTVKKSNF |
|