Gene
| Gene Model ID | pfu_aug2.0_1022.1_08100 |
|---|---|
| Locus | scaffold1022.1 : 101116 ... 112491 : + |
| To GenomeBrowser | scaffold1022.1:101116..112491 |
| Genes list of scaffold | scaffold1022.1 |
| Synonym | pfu_aug1.0_55510.1_41635 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1022.1_08100.t1 | 5 | 1 | WD40 | 2 | 34 | 4.5e-33 | 111.9 | 3.4e-06 | 0.013 | 15.4 |
| pfu_aug2.0_1022.1_08100.t1 | 5 | 2 | WD40 | 43 | 78 | 4.5e-33 | 111.9 | 2.1e-08 | 7.7e-05 | 22.4 |
| pfu_aug2.0_1022.1_08100.t1 | 5 | 3 | WD40 | 82 | 119 | 4.5e-33 | 111.9 | 4.2e-13 | 1.5e-09 | 37.3 |
| pfu_aug2.0_1022.1_08100.t1 | 5 | 4 | WD40 | 131 | 149 | 4.5e-33 | 111.9 | 2.8e-05 | 0.11 | 12.4 |
| pfu_aug2.0_1022.1_08100.t1 | 5 | 5 | WD40 | 152 | 188 | 4.5e-33 | 111.9 | 3.6e-07 | 0.0013 | 18.5 |
| pfu_aug2.0_1022.1_08100.t1 | 1 | 1 | PFU | 380 | 495 | 8.89825e-43 | 144.9 | 0.0 | 1.60028e-42 | 144.2 |
| pfu_aug2.0_1022.1_08100.t1 | 2 | 1 | PUL | 573 | 591 | 0.0 | 170.1 | 0.04 | 150.0 | 1.0 |
| pfu_aug2.0_1022.1_08100.t1 | 2 | 2 | PUL | 610 | 860 | 0.0 | 170.1 | 0.0 | 0.0 | 167.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1022.1_08100.t1 | gi|699682692|ref|XP_009903207.1| | PREDICTED: phospholipase A-2-activating protein [Picoides pubescens] | 0.0 |
| pfu_aug2.0_1022.1_08100.t1 | gi|291240521|ref|XP_002740172.1| | PREDICTED: phospholipase A-2-activating protein-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1022.1_08100.t1 | gi|514725634|ref|XP_005014974.1| | PREDICTED: phospholipase A-2-activating protein isoform X1 [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_1022.1_08100.t1 | gi|704457178|ref|XP_010073577.1| | PREDICTED: phospholipase A-2-activating protein [Pterocles gutturalis] | 0.0 |
| pfu_aug2.0_1022.1_08100.t1 | gi|694656599|ref|XP_009484177.1| | PREDICTED: phospholipase A-2-activating protein [Pelecanus crispus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1022.1_08100.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1022.1_08100.t1 atgaggggccacaacaactttatatctgctgtgtgcgttatgccccctgatactgtgtttgaacatggcctgataatgac tgggagtaacgacaatacaatcctcgcttataccccagaatcaccgcagcccatttacaaattggagggacatgaagcta atgtttgtgcccttgcagctggtaaatttggtactttgctcagtggttcatgggataaaactgcaaaagtttggctgaat caaaaatgtgtcatgacactgaaaggtcacgaatcagctgtttggggagttggcataatgccagagcatggttacatgtt aacaggatcagctgatcgaacaatcaaattatggaaagcaggaaaatgtgaaaggacctttacagccatgcttccaaacg gagaggattttgtgagcagtggagaagatagaacagtgagagtgtggagaggcggaaaatgtgtacaaacgatagcccac ccagcccagtccgtgtgggcagtgtgtgtactacctaatggggatatagtcacaggatcaagtgatggagtaataagagt ttttaccactagtcccaatcgtacagctccagaagaggagcaaaaagcttacgaggagcaagtctcctccactgctgtac ctacacaactaggtgatatcaagtcagaggacctgcctggtcctgaagtactcaacaatcctggtaggtcactggttata ctatatatttatagtgtcctctataaggagcaagtctcctccactgctgtacctacacaactaggtgatataaagtctga ggacctgcctggtcctgaagtactcaacaatcctggcagtggtcggaggaaaagattcgatagatttgcgtcctctcttg accaggacgatttacagagcgaatctctggatgaaagggacattttggtccggtctgatgatatattggacattgattcg agatcacagatttcagactcgagatctcatatatcagacactagatctcatctatcggatacatctttggaccaggagtc tgttgcagctacatctgagcaagtctcatccactgctgtacctacacaactaggtgatatcaagtcagaggacctgcctg gtcctgaagtactcaacaatcctggaactaaagatggacaacagaagattgtaagacagggcaataacatagagttatat cagtgggactctacccagagagaatggaagaaaataggagacgtggtgggctcaagtggaggaacgcagcaaacctcggg aaaaactctacacgaaggaaaggaatatgactatgtattcagtgttgacatagaggaagggaaaccccctctgaagctgc cgtttaatgtgacggaggatccttggtttgccgcccagaaatttttagaaaagaacggcttgagtcagctgttccttgac caagtagccaactttattgtggagaatacaaagggcgtaacattaggtcgccagaatccacagtatgccgatcctttcac aggagggaaccggcatgtacctggatctgacaacttacataacggaggtactggggatgatccattcacaggagggggga ggtacataccaggaagtggtgaccaacctgctcaaccttcattcggggccgacccatttactggttccagtagctatagt acccaagcagcaacccagcctttacctacaaataactacttcccccaaaaaacctatgtactgtttgaatcaggaaatcc tgcaccaattattggttccagtagctatagtacccaagcagcaacccagcctttacctacaaataactacttccccaaaa aacctatgtactgtttgaatcaggaaatcctgcaccaattattggtgaataagttgaaggaatttaacggtaaagtagac tctggtatacagctgtcagacacccaacttgacggtatacataaaatgctggaaggaaccacggttacagaggagagcat gaatacactactggaagtcctttacaggtggcctccagaatacatatttccaggattagacgtactaaggataaccatca ggaatcccaaagtttgtcagaaattctgtaatgtggaagattttctggagagacagttaggctatcttactaatgataca ccagctcccgctcaaatgttaacgcttagaactttctgtaatatgttcaaacagccgtcaggagagaaaatccttgtagc aaacagagatcgtgttattactccttcccttaattgtagactaactcaaaacaaaaacattcaaatagctctatgtacgc tactgttaaattattccgtctatctccaaaacaaagtggacgaggaagccaagtcgcagtgtctcctagccatcgccagt gtactagagaacccgttagattccgaggctcagttccgtttactggtcagtctgggcacgctcatgtccagtgatgatgg agtcagagccctcgctcagtcactcgagatagaaaacctagtatcaccgctacaaaacacggtagaaccaaagaagctcc cagactgtgccagttatatcctgaagctactcagatga |
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Protein
| Protein ID | pfu_aug2.0_1022.1_08100.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1022.1_08100.t1 MRGHNNFISAVCVMPPDTVFEHGLIMTGSNDNTILAYTPESPQPIYKLEGHEANVCALAAGKFGTLLSGSWDKTAKVWLN QKCVMTLKGHESAVWGVGIMPEHGYMLTGSADRTIKLWKAGKCERTFTAMLPNGEDFVSSGEDRTVRVWRGGKCVQTIAH PAQSVWAVCVLPNGDIVTGSSDGVIRVFTTSPNRTAPEEEQKAYEEQVSSTAVPTQLGDIKSEDLPGPEVLNNPGRSLVI LYIYSVLYKEQVSSTAVPTQLGDIKSEDLPGPEVLNNPGSGRRKRFDRFASSLDQDDLQSESLDERDILVRSDDILDIDS RSQISDSRSHISDTRSHLSDTSLDQESVAATSEQVSSTAVPTQLGDIKSEDLPGPEVLNNPGTKDGQQKIVRQGNNIELY QWDSTQREWKKIGDVVGSSGGTQQTSGKTLHEGKEYDYVFSVDIEEGKPPLKLPFNVTEDPWFAAQKFLEKNGLSQLFLD QVANFIVENTKGVTLGRQNPQYADPFTGGNRHVPGSDNLHNGGTGDDPFTGGGRYIPGSGDQPAQPSFGADPFTGSSSYS TQAATQPLPTNNYFPQKTYVLFESGNPAPIIGSSSYSTQAATQPLPTNNYFPKKPMYCLNQEILHQLLVNKLKEFNGKVD SGIQLSDTQLDGIHKMLEGTTVTEESMNTLLEVLYRWPPEYIFPGLDVLRITIRNPKVCQKFCNVEDFLERQLGYLTNDT PAPAQMLTLRTFCNMFKQPSGEKILVANRDRVITPSLNCRLTQNKNIQIALCTLLLNYSVYLQNKVDEEAKSQCLLAIAS VLENPLDSEAQFRLLVSLGTLMSSDDGVRALAQSLEIENLVSPLQNTVEPKKLPDCASYILKLLR |
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