Gene
| Gene Model ID | pfu_aug2.0_1029.1_31372 |
|---|---|
| Locus | scaffold1029.1 : 87305 ... 92715 : - |
| To GenomeBrowser | scaffold1029.1:87305..92715 |
| Genes list of scaffold | scaffold1029.1 |
| Synonym | pfu_aug1.0_168.1_29122 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1029.1_31372.t1 | 1 | 1 | SPATIAL | 52 | 277 | 2.8026e-45 | 154.8 | 0.0 | 4.2039e-45 | 154.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1029.1_31372.t1 | gi|524868453|ref|XP_005091029.1| | PREDICTED: protein TBATA-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1029.1_31372.t1 | gi|585695592|ref|XP_006822050.1| | PREDICTED: protein TBATA-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_1029.1_31372.t1 | gi|390354994|ref|XP_789620.2| | PREDICTED: protein TBATA isoform X2 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_1029.1_31372.t1 | gi|260802224|ref|XP_002595992.1| | hypothetical protein BRAFLDRAFT_123731 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1029.1_31372.t1 | gi|198422329|ref|XP_002121615.1| | PREDICTED: protein TBATA [Ciona intestinalis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1029.1_31372.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1029.1_31372.t1 atgagccagtcggaggtgtttgtcccgactggaggggatctgcacgcccgaccgggccctgtggaccagggctacatggc gtccatggacaccttcaggaagcgcccctccacacagtcaggctacagatttggtcaacttagtcagaactccttcttca cgaggcacaatccacacccagcaagggtcagacatataaaaggtctccttgatgtccctatatgcgctgtaaacgacgat ggatatttctctaaccccaagtactctctccagtttcctccaaatcagttcaataataagcagttaggaaaatggaaggg gaagattccagtcaatgccatcaatgtgaattctcagcttcatcccatcaacacagtgacgggactgcaatactttactg ggctgaacagttatccattcagagaaagggcggtgcctagggtcgggctagttcctgtaacagaggcttggaggaatgag ttggcggctctgacccgagcattaggcgctgaacctgatgacgtgacagcccaaagagacccgacacagccaatggaaag accgaaaaccatgtactcagaaacaacgggaagactgattcccccgccatcacgtgcaatgtcacgtggtcagtcccgac aagcttcacggcaaggcaggatgggacagctgcaacacatagctgctgaaccagatatggaggcaatggtactgtccatg ctgtgtcagatattacagacagaggatgtcaatgctgtacaagcttggctagtgtccgccggagatagagagaagactat agtgatggacctgatcaaagccgccatgtcgggtaaggacgattactatcaacgtgatatgaaccaggaattcctggagg aacaaaccagaaccaaactgccaccaatcaacgaaacccaaaaaccatcaggagcagacgacaatattgaccttattaaa cattacgacagactggtattagacgatgagggtgttcccggggagccaagcatggacgctgtgaggaagacagagggacc gatggtggtaccagctccgcctccccaggtgccacagccacccgtcatcaaggaggtagtcagagatcccatggacgata gtaagatcattaatctcataaacatcaaaataactattcttaatggaaaatacccattggataaaaaagacatctaa |
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Protein
| Protein ID | pfu_aug2.0_1029.1_31372.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1029.1_31372.t1 MSQSEVFVPTGGDLHARPGPVDQGYMASMDTFRKRPSTQSGYRFGQLSQNSFFTRHNPHPARVRHIKGLLDVPICAVNDD GYFSNPKYSLQFPPNQFNNKQLGKWKGKIPVNAINVNSQLHPINTVTGLQYFTGLNSYPFRERAVPRVGLVPVTEAWRNE LAALTRALGAEPDDVTAQRDPTQPMERPKTMYSETTGRLIPPPSRAMSRGQSRQASRQGRMGQLQHIAAEPDMEAMVLSM LCQILQTEDVNAVQAWLVSAGDREKTIVMDLIKAAMSGKDDYYQRDMNQEFLEEQTRTKLPPINETQKPSGADDNIDLIK HYDRLVLDDEGVPGEPSMDAVRKTEGPMVVPAPPPQVPQPPVIKEVVRDPMDDSKIINLINIKITILNGKYPLDKKDI |
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