Gene
| Gene Model ID | pfu_aug2.0_1029.1_31373 |
|---|---|
| Locus | scaffold1029.1 : 113187 ... 142305 : - |
| To GenomeBrowser | scaffold1029.1:113187..142305 |
| Genes list of scaffold | scaffold1029.1 |
| Synonym | pfu_aug1.0_10775.1_53587 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1029.1_31373.t1 | 1 | 1 | RVT_1 | 165 | 321 | 5.1e-16 | 58.6 | 2.1e-19 | 1.1e-15 | 57.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1029.1_31373.t1 | gi|558139107|ref|XP_006118139.1| | PREDICTED: uncharacterized protein LOC102443889 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_1029.1_31373.t1 | gi|512887667|ref|XP_004920618.1| | 0.0 | |
| pfu_aug2.0_1029.1_31373.t1 | gi|676430026|ref|XP_009045792.1| | hypothetical protein LOTGIDRAFT_237661 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1029.1_31373.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1029.1_31373.t1 atgaatcctcatactcgaaggaccagtcctcctataagaggaggaagtcgagcaagacatttcgggattctcaatctgga agatcaaaattcgagaaattttctagttcccgtgacaaaggatctggtaaccagaatcagtcggggtttctcctgtgcaa cagcaagtagatttgaatctaccgctccatctaatgaattttttggaaagtcaaattcacacaccagtagggtgcagatt gattcaatttgtaaaagagtaggacgaaatcaccaccgatcaatggattttagatgtagtccaacagggcttaaaacttg tgtttcgaaaccctcctatactaactggaacaagggtaacatttgctcagaacgatgttcaaaaagcatttttttattag aagaggtagaaagcttgttaggaaaacaagctatagagttagttcctcccggtcaagaaggtcaagggttttattcaaca tttttccttgcacagaagaaggacggcggttatcgtccaatattgaatctaagaccgttaaacaagtacctaaaggtgca acatttcaagatggaaacattacggtccataattcaagctctggaaaagggagattgggtggcatcgttggatctaaagg atgcatatcttcatgtaccagtgtttccaccgcaccgcatatttctccgattttgcatcaacaatcgccattatcagttt cgctcaatgcctttcgggctagcgatagctcccagaatttttacaaagatagtgacaactataggaggctaccttcgcat gaaagacatttacatctacatgtatctagacgactggttaatcaaaagcagagaacctatcagccttctctcacacctat tcacaacattacacaaactaatcgacttgggtcttgtagtgaacctagagaaatcacatctcaatccatctcagaagata actgatctgggagctcggttcaatctacaaatgggaatagtttgtccaaccgtggaacgttataccaatttatgccaaac tatttctactattacccagcaggcttttgtttcggcccgttcatttctccgaattttgggccttatggcttcatgcatag atttagtacacctagcgagactacacatgcgacccatccagctatacctcttgtgccattggtctccgagacagggcgac atatcgcatctcgttcagatcaaggactccctgaagcctcacttggcatggtggacccaggggtcaaacattttcagggg gggcagtactggaacagaggcttccagattacacaatgtggacggatgcctccaatcaaggctggggagcccatatgggc aatcagagtgtatcgggaatatggacactttcggacaaagcaaaacacataaacttcctggaaatgttagcagtgcagaa agcacttactcacttcaggaaccccttaataggcaaacttctcatgataaggaacgacaactcgacagtggtgtcttaca tcaatcgacaaggggggacgaggtctcctcagttgtgcatgttagtgaggacaatttatcaatggtgcatggaatggaac attcagatcaaagcagctcacattccgggcaagaaaaatgtactggcagacagtttgtctcgagggaatgtgaaagtgaa aataacagagtggagcctgtgtcaaacaatagcagatcagctcttcaacatttatacaaaaccaaacatagacttgtttg caacaagagaaaatcgcaaaattcagatattctgctccccgtatccggagccggaagcttggaattgcgacgctctggcg tgcagttggacggggatttacgcatatgcgtttccctcacccatattaatcccaaggatacttcagaaaatgaaacagga gatgtgtacactcctactgaattttcacaatggaaaggaagggatctccaacaacactcggttgcagcacatactgcaaa acccaaatacacacaaagcaaaaacacagggcagactcttacagatagagacccaaaagggacgaggaacaccaactcac accatagaaacatgaaacacaaaagaccacacacaaatcaacgaggcaaatgggcaaccggtgccgacttaggacggcca tctgccacgcaagaagcagatggtgtggacaccaagcaatttgcatataagttccaagcagagactccaattagacaagg acaggtttcaaatcaagatagatacctcctcgatagaattattgctcagttacagtctgcattacttgacattcacgagg tcttctttgtgattcccgtgtgggaaagaatgagcttgatttcccagtcacgacagctatgggaggaaaaacggctacga gaaagtaataccaccagatccagtgtatcgagttctcagcccagaatcagttcagctacacttaaagccatggaacggaa aagaagggcacagtatcctcttacactgtacaatgtactacataaaacattagaggcagaagtagctgtgtttggtgata taaataggccaaagtccgccccgccatgtgaagttagccagaggaaatcccaacagcaatcaatagatctcagtggaccc atacgcagacaataccaatttcttttcaccagggccctacgaccccttcaaggacatggtgttacatcacagagtggaaa tgtgacagccagtcttcctaatgtctttatttattaccaacaggaaagaaaatctaacaacaatggatcaatgatggcaa ctggagcaatgaatcgtcccttccttttcctgtgtggtagagcttggactcccaagtccttctctatagccattgtgata atcactgtgatagttaatgaatacctcatatacattatacaaagtcagaggtggccaaacatccctgttacagatagaga tccagataatgtacaagtactgttgttagtgtcagatcctcaactacagggttataaagatgaacctggctttccgtttg gtgcaataacaagatgggactctgataggtttttgagtcagacattctggttggctatgtcccacaccaaaccagatgct gtgatatacctaggagatctgatggatgaaggaagtaaggcatccaaagaagattataaatactgctactatagattcca tcaaatttttgcactagctcaaaaacttaagaatatctacattcctggtgataatgatgtcggtggagagggacgggact ttaggacagaggaaaaagtcaaaagatttgaactgcattttgaagaattgaaaggtgttagcaaccacaagtttatagac tatgtaaagtccatggttttcccgtgcgctgattgtatgggtgacgactctacatcctggtccctacagaggagatttct gccaaacgggtttataatggagaatataacacagagtaaagaatttataatggaagtgatggtacctacgtgtagttata gaatgggagaaccagaaatgggatatggcgtagctgtgatacaaaaaaatggtcttttccattatggtgttttatggagt ccctctcgctacaaagtgttatatagttactgtttgatcggagtaagtttagttttatttaatctgactgtctggatgaa ggttaaacgttacggatcccagaagagatga |
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Protein
| Protein ID | pfu_aug2.0_1029.1_31373.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1029.1_31373.t1 MNPHTRRTSPPIRGGSRARHFGILNLEDQNSRNFLVPVTKDLVTRISRGFSCATASRFESTAPSNEFFGKSNSHTSRVQI DSICKRVGRNHHRSMDFRCSPTGLKTCVSKPSYTNWNKGNICSERCSKSIFLLEEVESLLGKQAIELVPPGQEGQGFYST FFLAQKKDGGYRPILNLRPLNKYLKVQHFKMETLRSIIQALEKGDWVASLDLKDAYLHVPVFPPHRIFLRFCINNRHYQF RSMPFGLAIAPRIFTKIVTTIGGYLRMKDIYIYMYLDDWLIKSREPISLLSHLFTTLHKLIDLGLVVNLEKSHLNPSQKI TDLGARFNLQMGIVCPTVERYTNLCQTISTITQQAFVSARSFLRILGLMASCIDLVHLARLHMRPIQLYLLCHWSPRQGD ISHLVQIKDSLKPHLAWWTQGSNIFRGGSTGTEASRLHNVDGCLQSRLGSPYGQSECIGNMDTFGQSKTHKLPGNVSSAE STYSLQEPLNRQTSHDKERQLDSGVLHQSTRGDEVSSVVHVSEDNLSMVHGMEHSDQSSSHSGQEKCTGRQFVSRECESE NNRVEPVSNNSRSALQHLYKTKHRLVCNKRKSQNSDILLPVSGAGSLELRRSGVQLDGDLRICVSLTHINPKDTSENETG DVYTPTEFSQWKGRDLQQHSVAAHTAKPKYTQSKNTGQTLTDRDPKGTRNTNSHHRNMKHKRPHTNQRGKWATGADLGRP SATQEADGVDTKQFAYKFQAETPIRQGQVSNQDRYLLDRIIAQLQSALLDIHEVFFVIPVWERMSLISQSRQLWEEKRLR ESNTTRSSVSSSQPRISSATLKAMERKRRAQYPLTLYNVLHKTLEAEVAVFGDINRPKSAPPCEVSQRKSQQQSIDLSGP IRRQYQFLFTRALRPLQGHGVTSQSGNVTASLPNVFIYYQQERKSNNNGSMMATGAMNRPFLFLCGRAWTPKSFSIAIVI ITVIVNEYLIYIIQSQRWPNIPVTDRDPDNVQVLLLVSDPQLQGYKDEPGFPFGAITRWDSDRFLSQTFWLAMSHTKPDA VIYLGDLMDEGSKASKEDYKYCYYRFHQIFALAQKLKNIYIPGDNDVGGEGRDFRTEEKVKRFELHFEELKGVSNHKFID YVKSMVFPCADCMGDDSTSWSLQRRFLPNGFIMENITQSKEFIMEVMVPTCSYRMGEPEMGYGVAVIQKNGLFHYGVLWS PSRYKVLYSYCLIGVSLVLFNLTVWMKVKRYGSQKR |
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