Gene
| Gene Model ID | pfu_aug2.0_103.1_10270 |
|---|---|
| Locus | scaffold103.1 : 382658 ... 389611 : - |
| To GenomeBrowser | scaffold103.1:382658..389611 |
| Genes list of scaffold | scaffold103.1 |
| Synonym | pfu_aug1.0_19.1_57916 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_103.1_10270.t1 | 1 | 1 | Band_3_cyto | 1 | 100 | 5.8e-29 | 101.3 | 1.1e-32 | 8.0e-29 | 100.9 |
| pfu_aug2.0_103.1_10270.t1 | 1 | 1 | HCO3_cotransp | 142 | 592 | 0.0 | 573.2 | 0.0 | 0.0 | 572.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_103.1_10270.t1 | gi|524867563|ref|XP_005090592.1| | PREDICTED: electroneutral sodium bicarbonate exchanger 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_103.1_10270.t1 | gi|524864068|ref|XP_005088872.1| | PREDICTED: electrogenic sodium bicarbonate cotransporter 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_103.1_10270.t1 | gi|746863133|ref|XP_011062515.1| | PREDICTED: sodium-driven chloride bicarbonate exchanger isoform X3 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_103.1_10270.t1 | gi|746863135|ref|XP_011062517.1| | PREDICTED: sodium bicarbonate cotransporter 3 isoform X4 [Acromyrmex echinatior] | 0.0 |
| pfu_aug2.0_103.1_10270.t1 | gi|746863131|ref|XP_011062514.1| | PREDICTED: sodium-driven chloride bicarbonate exchanger isoform X2 [Acromyrmex echinatior] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_103.1_10270.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_103.1_10270.t1 atggtgggcgtagtggacgaactacgaaatagactttgtgcttttgtgcgcctacgcgaagcaagagatatcggtcccat aacggaagtgacgttaccaacacgttttatttttgtgatgttggttccgaggaaggaaattgacctggctgtggagatcg gtcgctgcgtgggagcattgatgacggacgagattttcactgagatcgcctacaaattcacggacaaagttgaagtatta tcagccattcaggatttcaccagtcatgtgacagtcctgccacctgcgtgctgggatcctgccattagaatagaaccacc ggaagttcttccgacgaaagaaaaatttcgccaaacgccaaacacgtttacttgtgaaaatggtggaaacgggaaatcca gcgagggtcacgctgaccccacccttcaaaggactggcagattatttggcggcctaattcaagacatcaagagaaaagcc aaatggtataaaagtgacttcacggactccttacatttacaatgcttagcgtcctttgtctatttatttctggcgacctt gaccccgaatgtgacctttggtggactgcttggtcaagcaactgaccagtacatgggaactatggagtgtatattagcgg cgtctatctgtggtgtaatcttcgccctgttcgccggtcaaccactcaacatattaggcagtactggacctatgttagtc ctggaaggaataatatacaaattctgcttgagccaacattgggactacatgccggtcagattgtgggtggggctttggac tgccttctttatgctagtcatcgttgcctttgatcttagtgcacttgttcgttatatcacacgatttacagaggaatcct tcgctttcctcatcgccttgatcttcattgtcaaagcattccaaaaactgatagaaatagagcacaaaatgcctgtaaca tttggcagtgtagacacaactcctaaagactgcttctgcgtcatcttgaatacatcacatttacatttagtctcaaacga ttccattagtgctacatcaacttttgatgtgatggacaccatttctgggaacttatcttccttaagaaataacacgagca gcaacagttctgaaggcatcatggccgcgttgggttattgtgcagagcgcggaggaacactactcggaagtgggtgcaaa gaggcagattacgttcctgatgtattctttctcagtatcttacttttcctgttcactttcggcatcgcgtacggattgac atccttcaaaaacagccatttcttcccccaatttgtacgacaaactttgagtgactttgctgtgctgatagccatcgtag ttatggtacttgtggactatttatgcggaattccaaccccgaaattgatggtgccatcagaatttaagccaacaagatca gatcgaggctggttcatcaaccccatcagcccccagaatccctggtggatcgccattgccgcggcacttccggcgcttct ttctatgattcttatatttatggatcaacaaataacagccgttatcgttaataggagagaaaataaattaaaaaaaggaa gcggctaccatttggacatgctggtgctcgcggttctgatcgtcattctatcggtactcggattaccctggtttgtagct gccacggtatcggccattgcgcatgtcatgagtttgaagaaagagtccgagtgtacggcgcctggagagaaaccaacatt cctgggtgtcagaagtgagctgccctcacccttgggtagggtgcatgtattcagaggcggaacagagagtaacagcttta ttcgtgggaattcttag |
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Protein
| Protein ID | pfu_aug2.0_103.1_10270.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_103.1_10270.t1 MVGVVDELRNRLCAFVRLREARDIGPITEVTLPTRFIFVMLVPRKEIDLAVEIGRCVGALMTDEIFTEIAYKFTDKVEVL SAIQDFTSHVTVLPPACWDPAIRIEPPEVLPTKEKFRQTPNTFTCENGGNGKSSEGHADPTLQRTGRLFGGLIQDIKRKA KWYKSDFTDSLHLQCLASFVYLFLATLTPNVTFGGLLGQATDQYMGTMECILAASICGVIFALFAGQPLNILGSTGPMLV LEGIIYKFCLSQHWDYMPVRLWVGLWTAFFMLVIVAFDLSALVRYITRFTEESFAFLIALIFIVKAFQKLIEIEHKMPVT FGSVDTTPKDCFCVILNTSHLHLVSNDSISATSTFDVMDTISGNLSSLRNNTSSNSSEGIMAALGYCAERGGTLLGSGCK EADYVPDVFFLSILLFLFTFGIAYGLTSFKNSHFFPQFVRQTLSDFAVLIAIVVMVLVDYLCGIPTPKLMVPSEFKPTRS DRGWFINPISPQNPWWIAIAAALPALLSMILIFMDQQITAVIVNRRENKLKKGSGYHLDMLVLAVLIVILSVLGLPWFVA ATVSAIAHVMSLKKESECTAPGEKPTFLGVRSELPSPLGRVHVFRGGTESNSFIRGNS |
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