Gene
| Gene Model ID | pfu_aug2.0_103.1_10271 |
|---|---|
| Locus | scaffold103.1 : 389915 ... 392441 : - |
| To GenomeBrowser | scaffold103.1:389915..392441 |
| Genes list of scaffold | scaffold103.1 |
| Synonym | pfu_aug1.0_19.1_57916 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sodium-driven chloride bicarbonate | GO:0005886 GO:0006814 GO:0006821 GO:0015301 GO:0015701 GO:0015992 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_103.1_10271.t1 | 1 | 1 | Band_3_cyto | 63 | 157 | 1.7e-15 | 57.2 | 1.4e-19 | 2.0e-15 | 57.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_103.1_10271.t1 | gi|676435696|ref|XP_009047641.1| | hypothetical protein LOTGIDRAFT_139303 [Lottia gigantea] | 2.0e-25 |
| pfu_aug2.0_103.1_10271.t1 | gi|524874530|ref|XP_005094000.1| | PREDICTED: electroneutral sodium bicarbonate exchanger 1-like [Aplysia californica] | 3.0e-23 |
| pfu_aug2.0_103.1_10271.t1 | gi|195471543|ref|XP_002088062.1| | GE18368 [Drosophila yakuba] | 6.0e-23 |
| pfu_aug2.0_103.1_10271.t1 | gi|195338877|ref|XP_002036050.1| | GM13591 [Drosophila sechellia] | 7.0e-23 |
| pfu_aug2.0_103.1_10271.t1 | gi|442626527|ref|NP_001260182.1| | Na[+]-driven anion exchanger 1, isoform I [Drosophila melanogaster] | 8.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_103.1_10271.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_103.1_10271.t1 atggagagtgtaacaatcacggtagaaaatcaagaaacggatccggacggtggaattccggttctccatgacgacatcaa cgatgggcctcatcatctattctgccaaatggacattctacgtaaatataatgatgacgtcatctggaaggaagcaagga gatgggtgaagtttgaggaggtctgggaggagaaaggtaaacgatggtccaagccacacgtgtcctcgctgtacatgcag tgtctcacagacttacacatgacactggtgtcacatccatgtgtagttgacgttgaggcagattccatgtttgacgtcgt tgatatattgttagatgaatggtcagagcatggaacactcaacgacatactttgcaatcatatccgggcagttctgctga aaaggcacaaacatcctcacgtgacccggaagcacatggctctacatgcgcgaaacagagaaatcgtagaactcgtcgtt ccgtctccggataaaaaacgaaagcggaatctgcataacacacagggtacagataatggtaaggacaatttttga |
|
Protein
| Protein ID | pfu_aug2.0_103.1_10271.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_103.1_10271.t1 MESVTITVENQETDPDGGIPVLHDDINDGPHHLFCQMDILRKYNDDVIWKEARRWVKFEEVWEEKGKRWSKPHVSSLYMQ CLTDLHMTLVSHPCVVDVEADSMFDVVDILLDEWSEHGTLNDILCNHIRAVLLKRHKHPHVTRKHMALHARNREIVELVV PSPDKKRKRNLHNTQGTDNGKDNF |
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