Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1032.1_08110
Locus scaffold1032.1 : 54536 ... 63534 : +
To GenomeBrowser scaffold1032.1:54536..63534
Genes list of scaffold scaffold1032.1
Synonym pfu_aug1.0_30650.1_47987

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1032.1_08110.t1 1 1 7tm_1 51 383 1.1e-29 103.4 4.9e-33 1.8e-29 102.6

Transcript
Transcript IDpfu_aug2.0_1032.1_08110.t1
Definition-
>pfu_aug2.0_1032.1_08110.t1
atgaattcatcaataaacaaccaaagtggaatggtttattcatttaattccacgggagaacttattggcaaagtgaatga
tgccttattcggcaatatttttgtaccaagatttgtttacacaattctaatgatgttgttatgttaccctggaaacgttc
tggtgttctacatttactttgcgagatggagaaaaaccacatctagagtttttatccttgccctcgcattgtttgacctg
gtgaacggtttcgtaacaaccccaacggaacttgagttcatgtggaatatattccattggaaaaacgcgccgatatgcaa
gttttcgcgctttttgacgttcatgatgaacatcgcttcctcttttacgctagttgggatcgctatcgaccgatacatta
gaatttgtaaacccctcagttctccaatgagcacaaaaactgcaaatatttgggtttttgtaagttgttttgctgctgtg
ctatttgcatggcctgctctagttctacatgggttcagaactataaagcacgttttacccgagacaaaaatcgttgcggt
cggatcaaagtgctcagttgatgactatttctttcctacaaaatatcctctgatatttacgatagtgcttttaactggaa
ctttactgattgacatcattttaatcacgatctacacactcatggtaattcaggtagtaaaaagtgcattctttaatcgg
aatcgtcattcttcagttcgaacgaagatgcaaaaaacaagcacttccgcttccaaaacagatgacgacatcattgacga
caataactcgagtagcgaaacaaaaggtacatcaaaaagaggaacattttcaaaaatgtttcatggaccgataaaggtaa
atggacctaatcagaacaatggcaagaaacaaagatctttatccgtacagagtgaaaaagctagacgtgcccgaatgatg
aaaacaacaaccatgctctttttggttacccttcttttcatggtgtcatttactccatactgtgtcatagctatctgtcg
gttcagcaatccaaaatactacctttctttgactacgactggaaaatgtgtttaccaattattccttaggtcctatcttt
taagtatgtctttaaatcctatcatctattgctttatgagtgtaaagttcaggaaagaatgtaagcatgggattaggaaa
ctgatgtgctggaaaagatga

Protein
Protein IDpfu_aug2.0_1032.1_08110.t1
Definition-
>pfu_aug2.0_1032.1_08110.t1
MNSSINNQSGMVYSFNSTGELIGKVNDALFGNIFVPRFVYTILMMLLCYPGNVLVFYIYFARWRKTTSRVFILALALFDL
VNGFVTTPTELEFMWNIFHWKNAPICKFSRFLTFMMNIASSFTLVGIAIDRYIRICKPLSSPMSTKTANIWVFVSCFAAV
LFAWPALVLHGFRTIKHVLPETKIVAVGSKCSVDDYFFPTKYPLIFTIVLLTGTLLIDIILITIYTLMVIQVVKSAFFNR
NRHSSVRTKMQKTSTSASKTDDDIIDDNNSSSETKGTSKRGTFSKMFHGPIKVNGPNQNNGKKQRSLSVQSEKARRARMM
KTTTMLFLVTLLFMVSFTPYCVIAICRFSNPKYYLSLTTTGKCVYQLFLRSYLLSMSLNPIIYCFMSVKFRKECKHGIRK
LMCWKR

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495