Gene
| Gene Model ID | pfu_aug2.0_1033.1_11388 |
|---|---|
| Locus | scaffold1033.1 : 6396 ... 47556 : + |
| To GenomeBrowser | scaffold1033.1:6396..47556 |
| Genes list of scaffold | scaffold1033.1 |
| Synonym | pfu_aug1.0_37.1_36248 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1033.1_11388.t1 | 2 | 1 | MYCBPAP | 386 | 812 | 0.0 | 385.3 | 0.0 | 0.0 | 383.6 |
| pfu_aug2.0_1033.1_11388.t1 | 2 | 2 | MYCBPAP | 897 | 941 | 0.0 | 385.3 | 0.062 | 910.0 | -1.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1033.1_11388.t1 | gi|676439599|ref|XP_009048905.1| | hypothetical protein LOTGIDRAFT_238557 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1033.1_11388.t1 | gi|390369879|ref|XP_785019.3| | PREDICTED: MYCBP-associated protein isoform X2 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_1033.1_11388.t1 | gi|390348685|ref|XP_001176753.2| | PREDICTED: MYCBP-associated protein isoform X1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_1033.1_11388.t1 | gi|390348683|ref|XP_003727055.1| | 0.0 | |
| pfu_aug2.0_1033.1_11388.t1 | gi|260827760|ref|XP_002608832.1| | hypothetical protein BRAFLDRAFT_89700 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1033.1_11388.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1033.1_11388.t1 atggagaactcagaaagtagcgataacatctttatggacaaggagtctattcaaccagaagacgtcaaaatgagaaagct caggaaaactcagtctcaacaaatattgctacagaaacgaaactctgagaaatccataggagtgaacaaatctacaagga taaaatcctgcggtagtgccttagagggaaagcttacacgtcaagacagcaagaccaacatggccaagtctttggaaagc cgtagaccaagtgctgcaatggtcaaactaaggggctctgtcagaacagtacaaatggtgtccaaattcagtaagtacag caacaacctaataaaggctgcgctgctgagaaaagcttcggacaaagtctcaaacacagccagtacgtcagaaaaggagg actccggtcgccccctgcagtccttcaaaaaggcactcggagggaaacgcccatcacaggatggggaaaatgtaacagct ggcacaaatcccgtggctgctgccttactgaggaaagccatgagtcgaggacacggggatgatcaaggggagagaaccat taataaagtttttggcgggcttagatcaaagatggttaccagtactgtggcacaatcactgtttgataagcttaagggta agaagaatgcccccgggacacctgacaagtctggcacaccctcacaggacgctggagacgacaaccaatcaccgaccaga aacgtcatctggaatgaggagatagaaaaactacagatcaaagaggatgacctgaaaaatctaagggaggtctctccacc aggacctcacaaatcacctaagacagacaaggtgatcgtgaagaagatgaaacctctctctgaaatcaacaaaccaaaac caaagattgtgacagtggccaagccagcccctcctgatgctccagtaaaggtccctgattactcaggatttgcagggcca cgctatgaccgtattggtgatgttattccacacagtcttctgggatcgtatgatgatttccacagagaggccatcaaacg tggagatttactggatttaccagaacctagaggtctggacatccaggaggaggtccccactgtaaagtatgagaaaaaac aaagggagaaaaaggaaaggagggaccacgctcatgcaaacgagaataatgcactgcggaactggcaactaaaaatgatg gaacggaaacgacaacagggatacatatcaaaattactgcagaagaatcccgaagatctggccatgaatgcggcagataa ctacaggaagattcaggaggagaggtacatcatagatagaaccataccggccatggattacggcaaaggatatcgtgtgg gaagtgagttttggaagcaacaggaaagatttggtgacgatgagactggtatacatatgaccttgacccagacagagcga ggttacccacgacctgtagaacatgttggtttgtctaagtcagtaagacaggagaagggatggcattggccaccttacca taccacgcccgtacactatccctggcataaaaacccttaccttgaggagaggaagaaacagttacagcctgtcatagatg aactggatcctcataaacctgactttgatggtctggagattatagggacagctaatcctgtggagagacagagggtagaa tctaacataggatttatagaggaaatgagagaggaggatgaaaaacttacaatagatgacgacgagctggatatagaccc agtgaaggatggtgaggagcctcagcctgagaccatctttggaccatccattacatttgctggtcagccagccagatgga caggggacagctcatcgtttgctgaccaggttggaatagaggccagagtaacatttgaatcttactcaagtgacagggtt acatcatatctatatatagtcaatgatggtaccacagcagtttactatgactggaagaaattaccgaaagacaatccatt tgacctagttcatgcccatgtacagagattttactttaacaatagttcaggtgtgatactgcctggagagacgatgaaat tcccgtttgtctttaagtcgcccaatgcgggtgtcttcacagaacaatggaagtttgagacccgcccacggctctgtggg ggtgcctcccttattgtgaccctcaggggaatagccctacaagaggacaaattcaaagtagaaagagaggaattggagag agatttacaacagaagcaagccgatcaagttgtacgacaaattatgtacgacattattagcggtattaaaactcctgatc gaccctcatcaccagttgatgcgtacattacagacgaggaaatattctctcgcaataatcctaagttacattataaccat gaatcagtgcaggagcttaagcagctctacttagagatagctccagaggaggagagagctggaaggatctgggatctctc tatacaagatctcaaagatgaaatattatgtatggatgaagaagatgaaagaaaagagaatttccttcaccagctcaata ctacagtatccaagatgtcatactgccaaaatcaacctacaaagaaaaatttatataaagttgggtacgagttactggta gagatggtagacggtgtagtgagggagtcagccatgctcagaaaatccataggattgccggaaaaagatcctgaggaatt tgctgaggatcaaacaaggaagacaaggtttaaaaaaacatggagacgcgcctcagtaatggttggacagaatcctagtt taatgccccaaattaagggcttggatcctagtgacgctaggagtaaaaaggcagaaaagactgcaaaacctgtccctgac aagaaagcgccacctccgaaggaccctaaagcagccaaaggagggaaagagactgctaaagcagaaccgaaaggtaaaac tccagtcccagccaagaagccggccagtagtcgtggtccatcagctacccccgggccggggagtatgttaccccctgaca gggagaggacacacacacctaccagtggtacacatagtcccatgcctgcagacgtagatcccgtgttgttcagaaaatat aaacagaaactcttagctcagacgtatctgatggtaggggataccatggaccagatggagcgggtttttgaggaggttct acagtcagaagaaagacctcccctgtcactgtga |
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Protein
| Protein ID | pfu_aug2.0_1033.1_11388.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1033.1_11388.t1 MENSESSDNIFMDKESIQPEDVKMRKLRKTQSQQILLQKRNSEKSIGVNKSTRIKSCGSALEGKLTRQDSKTNMAKSLES RRPSAAMVKLRGSVRTVQMVSKFSKYSNNLIKAALLRKASDKVSNTASTSEKEDSGRPLQSFKKALGGKRPSQDGENVTA GTNPVAAALLRKAMSRGHGDDQGERTINKVFGGLRSKMVTSTVAQSLFDKLKGKKNAPGTPDKSGTPSQDAGDDNQSPTR NVIWNEEIEKLQIKEDDLKNLREVSPPGPHKSPKTDKVIVKKMKPLSEINKPKPKIVTVAKPAPPDAPVKVPDYSGFAGP RYDRIGDVIPHSLLGSYDDFHREAIKRGDLLDLPEPRGLDIQEEVPTVKYEKKQREKKERRDHAHANENNALRNWQLKMM ERKRQQGYISKLLQKNPEDLAMNAADNYRKIQEERYIIDRTIPAMDYGKGYRVGSEFWKQQERFGDDETGIHMTLTQTER GYPRPVEHVGLSKSVRQEKGWHWPPYHTTPVHYPWHKNPYLEERKKQLQPVIDELDPHKPDFDGLEIIGTANPVERQRVE SNIGFIEEMREEDEKLTIDDDELDIDPVKDGEEPQPETIFGPSITFAGQPARWTGDSSSFADQVGIEARVTFESYSSDRV TSYLYIVNDGTTAVYYDWKKLPKDNPFDLVHAHVQRFYFNNSSGVILPGETMKFPFVFKSPNAGVFTEQWKFETRPRLCG GASLIVTLRGIALQEDKFKVEREELERDLQQKQADQVVRQIMYDIISGIKTPDRPSSPVDAYITDEEIFSRNNPKLHYNH ESVQELKQLYLEIAPEEERAGRIWDLSIQDLKDEILCMDEEDERKENFLHQLNTTVSKMSYCQNQPTKKNLYKVGYELLV EMVDGVVRESAMLRKSIGLPEKDPEEFAEDQTRKTRFKKTWRRASVMVGQNPSLMPQIKGLDPSDARSKKAEKTAKPVPD KKAPPPKDPKAAKGGKETAKAEPKGKTPVPAKKPASSRGPSATPGPGSMLPPDRERTHTPTSGTHSPMPADVDPVLFRKY KQKLLAQTYLMVGDTMDQMERVFEEVLQSEERPPLSL |
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