Gene
| Gene Model ID | pfu_aug2.0_1033.1_11391 |
|---|---|
| Locus | scaffold1033.1 : 117046 ... 133357 : + |
| To GenomeBrowser | scaffold1033.1:117046..133357 |
| Genes list of scaffold | scaffold1033.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mothers against decapentaplegic homolog 4 isoform x2 | GO:0000790 GO:0000978 GO:0001076 GO:0001077 GO:0001085 GO:0001658 GO:0001666 GO:0001701 GO:0001702 GO:0003190 GO:0003198 GO:0003251 GO:0003279 GO:0003360 GO:0003682 GO:0005518 GO:0005654 GO:0005737 GO:0005813 GO:0007183 GO:0007411 GO:0007492 GO:0007498 GO:0008285 GO:0010718 GO:0010862 GO:0014033 GO:0030308 GO:0030511 GO:0030513 GO:0030616 GO:0031005 GO:0032444 GO:0032525 GO:0032909 GO:0035556 GO:0036302 GO:0042118 GO:0042177 GO:0042803 GO:0045892 GO:0045944 GO:0046872 GO:0046982 GO:0048589 GO:0048663 GO:0048733 GO:0048859 GO:0051098 GO:0051797 GO:0060021 GO:0060391 GO:0060395 GO:0060548 GO:0060956 GO:0070411 GO:0070412 GO:0071141 GO:0072133 GO:0072134 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1033.1_11391.t2 | 1 | 1 | MH1 | 33 | 133 | 1.0e-39 | 134.6 | 3.79752e-43 | 1.9e-39 | 133.8 |
| pfu_aug2.0_1033.1_11391.t2 | 1 | 1 | MH2 | 284 | 496 | 0.0 | 245.4 | 0.0 | 0.0 | 244.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1033.1_11391.t2 | gi|189233891|ref|XP_971429.2| | PREDICTED: mothers against decapentaplegic homolog 4 isoform X3 [Tribolium castaneum] | 0.0 |
| pfu_aug2.0_1033.1_11391.t2 | gi|149064594|gb|EDM14797.1| | MAD homolog 4 (Drosophila), isoform CRA_c [Rattus norvegicus] | 0.0 |
| pfu_aug2.0_1033.1_11391.t2 | gi|557320114|ref|XP_006033205.1| | PREDICTED: mothers against decapentaplegic homolog 4 [Alligator sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1033.1_11391.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1033.1_11391.t1 atgacgacacaagcaccaacgtcagctgacgcttgtcttagtatagtacacagtcttatgtgtcacagacaaggaggaga aagtgaaagctttgccaaacgagccatagaaagtctggttaagaagcttaaagagaaaagagatgagttggacagtctta ttacagctataacaacaaatggagcccatcctaccaagtgtgtcaccatacaaagaactctggatggcaggttacaggtt gctggtaggaaaggatttccccatgttatttatgccaggatttggagatggccagacctacataagaatgagctgaaaca tgccaagttctgtcagtatgcgtttgaccttaaacaggacagtgtctgtgttaatccatatcattatgagagagttgttt caccaggcattgatttgtctggtttaaccatacagcatgcagctcctccatcaagacttgtgaaggatgagtatggtaat gagatcggactggatattgggagttctaacgaggcttctcagacagtccagcatcctccgcaggacagctttactcgtat aatggctgccaccgcgggtcctctgggtcaggggtcaaacggaccccaatccaccgtaccacatcagcaacaccatgcgg ctgctcaatcccatacgagcaccatggggaggggagggggacctggcacgcctgggaccccccactcccttcctatgtcc cctcaggcctcagcgctatcacccccacctcactcaggagctaatgtattagcccatggtatgacttctcctatagcgga gagttacggtggacaggtaccccatgtctcactccctcagtctcaagcctcaatgagcccattctcacgcagttccatgt cgggaggaggtcagtgggggagtagtaactcggctacgtgtacctacactcagtcacaggaccctcagttctggaataac aaccatctacagaccacagagattcaacaacctctgcctcctctaaccaatcaaaatcctccagagttctggtgtacgat aacatattttgagttagatcagcaagtgggggagacatttaaggtaccgtacagttataccacagtgacagtcgatggtt acacagatccttctagcctggataggttctgtttgggtcagctgtccaatgtacatagaacggatactagtgaaaaagcc agactacacataggtaaaggtgtacagttagattaccgtggtgagggagacgtgtggatacgatgtgtcagtgatcatag cgtgtttgtacagagttattacctggacagggaggcaggtagatcacctggtgatgcagtacacaaaatatatcccagtg cttacattaaggtatttgatattcgtcagtgtcaccgtcagatgcagcagcaggcggctacggcacaagctgccgcagca gctcaggctgcagcagtggccggcaatgtgccaggaccagcttctgtgggcggcatagcaccagctgtaggattaagtgc cgcggcaggtataggagtagatgatctcaggaggttgtgtatattaagactgagttttgtaaaaggttggggaccagact acccccgtcacagcattaaggagactccatgttggatagaagttcaactacaccgacctctacaacttctagatgaagtt ctacagaccatgccaatcaacgaaccaagacccagaggattcttcctaggctga |
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| Transcript ID | pfu_aug2.0_1033.1_11391.t2 |
| Definition | - |
>pfu_aug2.0_1033.1_11391.t2 atgacgacacaagcaccaacgtcagctgacgcttgtcttagtatagtacacagtcttatgtgtcacagacaaggaggaga aagtgaaagctttgccaaacgagccatagaaagtctggttaagaagcttaaagagaaaagagatgagttggacagtctta ttacagctataacaacaaatggagcccatcctaccaagtgtgtcaccatacaaagaactctggatggcaggttacaggtt gctggtaggaaaggatttccccatgttatttatgccaggatttggagatggccagacctacataagaatgagctgaaaca tgccaagttctgtcagtatgcgtttgaccttaaacaggacagtgtctgtgttaatccatatcattatgagagagttgttt caccaggcattgatttgtctggtttaaccatacagcatgcagctcctccatcaagacttgtgaaggatgagtatggtaat gagatcggactggatattgggagttctaacgaggcttctcagacagtccagcatcctccgcaggacagctttactcgtat aatggctgccaccgcgggtcctctgggagctaatgtattagcccatggtatgacttctcctatagcggagagttacggtg gacaggtaccccatgtctcactccctcagtctcaagcctcaatgagcccattctcacgcagttccatgtcgggaggaggt cagtgggggagtagtaactcggctacgtgtacctacactcagtcacaggaccctcagttctggaataacaaccatctaca gaccacagagattcaacaacctctgcctcctctaaccaatcaaaatcctccagagttctggtgtacgataacatattttg agttagatcagcaagtgggggagacatttaaggtaccgtacagttataccacagtgacagtcgatggttacacagatcct tctagcctggataggttctgtttgggtcagctgtccaatgtacatagaacggatactagtgaaaaagccagactacacat aggtaaaggtgtacagttagattaccgtggtgagggagacgtgtggatacgatgtgtcagtgatcatagcgtgtttgtac agagttattacctggacagggaggcaggtagatcacctggtgatgcagtacacaaaatatatcccagtgcttacattaag gtatttgatattcgtcagtgtcaccgtcagatgcagcagcaggcggctacggcacaagctgccgcagcagctcaggctgc agcagtggccggcaatgtgccaggaccagcttctgtgggcggcatagcaccagctgtaggattaagtgccgcggcaggta taggagtagatgatctcaggaggttgtgtatattaagactgagttttgtaaaaggttggggaccagactacccccgtcac agcattaaggagactccatgttggatagaagttcaactacaccgacctctacaacttctagatgaagttctacagaccat gccaatcaacgaaccaagacccagaggattcttcctaggctga |
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Protein
| Protein ID | pfu_aug2.0_1033.1_11391.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1033.1_11391.t1 MTTQAPTSADACLSIVHSLMCHRQGGESESFAKRAIESLVKKLKEKRDELDSLITAITTNGAHPTKCVTIQRTLDGRLQV AGRKGFPHVIYARIWRWPDLHKNELKHAKFCQYAFDLKQDSVCVNPYHYERVVSPGIDLSGLTIQHAAPPSRLVKDEYGN EIGLDIGSSNEASQTVQHPPQDSFTRIMAATAGPLGQGSNGPQSTVPHQQHHAAAQSHTSTMGRGGGPGTPGTPHSLPMS PQASALSPPPHSGANVLAHGMTSPIAESYGGQVPHVSLPQSQASMSPFSRSSMSGGGQWGSSNSATCTYTQSQDPQFWNN NHLQTTEIQQPLPPLTNQNPPEFWCTITYFELDQQVGETFKVPYSYTTVTVDGYTDPSSLDRFCLGQLSNVHRTDTSEKA RLHIGKGVQLDYRGEGDVWIRCVSDHSVFVQSYYLDREAGRSPGDAVHKIYPSAYIKVFDIRQCHRQMQQQAATAQAAAA AQAAAVAGNVPGPASVGGIAPAVGLSAAAGIGVDDLRRLCILRLSFVKGWGPDYPRHSIKETPCWIEVQLHRPLQLLDEV LQTMPINEPRPRGFFLG |
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| Protein ID | pfu_aug2.0_1033.1_11391.t2 |
| Definition | - |
>pfu_aug2.0_1033.1_11391.t2 MTTQAPTSADACLSIVHSLMCHRQGGESESFAKRAIESLVKKLKEKRDELDSLITAITTNGAHPTKCVTIQRTLDGRLQV AGRKGFPHVIYARIWRWPDLHKNELKHAKFCQYAFDLKQDSVCVNPYHYERVVSPGIDLSGLTIQHAAPPSRLVKDEYGN EIGLDIGSSNEASQTVQHPPQDSFTRIMAATAGPLGANVLAHGMTSPIAESYGGQVPHVSLPQSQASMSPFSRSSMSGGG QWGSSNSATCTYTQSQDPQFWNNNHLQTTEIQQPLPPLTNQNPPEFWCTITYFELDQQVGETFKVPYSYTTVTVDGYTDP SSLDRFCLGQLSNVHRTDTSEKARLHIGKGVQLDYRGEGDVWIRCVSDHSVFVQSYYLDREAGRSPGDAVHKIYPSAYIK VFDIRQCHRQMQQQAATAQAAAAAQAAAVAGNVPGPASVGGIAPAVGLSAAAGIGVDDLRRLCILRLSFVKGWGPDYPRH SIKETPCWIEVQLHRPLQLLDEVLQTMPINEPRPRGFFLG |
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