Gene
| Gene Model ID | pfu_aug2.0_1036.1_21363 |
|---|---|
| Locus | scaffold1036.1 : 178194 ... 200107 : + |
| To GenomeBrowser | scaffold1036.1:178194..200107 |
| Genes list of scaffold | scaffold1036.1 |
| Synonym | pfu_aug1.0_3000.1_66544 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| solute carrier family 35 member e3 | GO:0016021 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1036.1_21363.t1 | 3 | 1 | EamA | 3 | 37 | 9.5e-07 | 28.8 | 0.032 | 68.0 | 3.5 |
| pfu_aug2.0_1036.1_21363.t1 | 2 | 1 | TPT | 6 | 21 | 3.4e-25 | 88.4 | 2.1 | 4400.0 | -2.8 |
| pfu_aug2.0_1036.1_21363.t1 | 1 | 1 | UAA | 6 | 192 | 4.7e-09 | 35.5 | 4.0e-12 | 8.6e-09 | 34.7 |
| pfu_aug2.0_1036.1_21363.t1 | 3 | 2 | EamA | 43 | 59 | 9.5e-07 | 28.8 | 0.33 | 710.0 | 0.2 |
| pfu_aug2.0_1036.1_21363.t1 | 2 | 2 | TPT | 47 | 188 | 3.4e-25 | 88.4 | 1.6e-28 | 3.4e-25 | 88.4 |
| pfu_aug2.0_1036.1_21363.t1 | 3 | 3 | EamA | 65 | 185 | 9.5e-07 | 28.8 | 4.5e-10 | 9.5e-07 | 28.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1036.1_21363.t1 | gi|301765888|ref|XP_002918364.1| | PREDICTED: solute carrier family 35 member E3 isoform X1 [Ailuropoda melanoleuca] | 0.0 |
| pfu_aug2.0_1036.1_21363.t1 | gi|731260148|ref|XP_010642514.1| | PREDICTED: solute carrier family 35 member E3 isoform X1 [Fukomys damarensis] | 0.0 |
| pfu_aug2.0_1036.1_21363.t1 | gi|532086118|ref|XP_005328780.1| | PREDICTED: solute carrier family 35 member E3 [Ictidomys tridecemlineatus] | 0.0 |
| pfu_aug2.0_1036.1_21363.t1 | gi|512863613|ref|XP_004890450.1| | 0.0 | |
| pfu_aug2.0_1036.1_21363.t1 | gi|513027910|ref|XP_004875099.1| | PREDICTED: solute carrier family 35 member E3 isoform X3 [Heterocephalus glaber] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1036.1_21363.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1036.1_21363.t1 atgaccacaccaataataatggtcatccaaactatgttctatgaaaagtcattctctacgagaatcaaactcactgtgat tccaattaccattggagtatttctgaattcctgttatgatatgaaatttaattttcttggaattatcttcgcttctattg gagtccttgtcacctccctgtatcaagtgtgggtagcagagaagcagactgagtttcagatggattccatgcagttatta ttttaccaagcacccctgtctgcctcaatgctcatgttagtgataccgtttgtggaacccccaatcttcagtatccatgg agcattggggtcatggccaaccactgctttggttttggtgttcctgtcgggatgtatagcgttcgtcgttaacctctcca tatactggatcattggaaatctctcacctgtcacatataactttgtaggtcatttcaagttctgtgttacaatcgtcatt ggctttgtaattttcaaagacccattccaaatcatacagatcatgggaatcctcctcacgctgtgtggtattcttgccta tgcacacacaaaaatgaatgagcagcagcagaataaacagaaggaagtactgcctaccaactcctcggcatctaaagcct aa |
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Protein
| Protein ID | pfu_aug2.0_1036.1_21363.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1036.1_21363.t1 MTTPIIMVIQTMFYEKSFSTRIKLTVIPITIGVFLNSCYDMKFNFLGIIFASIGVLVTSLYQVWVAEKQTEFQMDSMQLL FYQAPLSASMLMLVIPFVEPPIFSIHGALGSWPTTALVLVFLSGCIAFVVNLSIYWIIGNLSPVTYNFVGHFKFCVTIVI GFVIFKDPFQIIQIMGILLTLCGILAYAHTKMNEQQQNKQKEVLPTNSSASKA |
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