Gene
| Gene Model ID | pfu_aug2.0_10412.1_09768 |
|---|---|
| Locus | scaffold10412.1 : 1 ... 5856 : - |
| To GenomeBrowser | scaffold10412.1:1..5856 |
| Genes list of scaffold | scaffold10412.1 |
| Synonym | pfu_aug1.0_2535.1_23007 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_10412.1_09768.t1 | 2 | 1 | Cadherin | 45 | 64 | 3.7e-12 | 46.3 | 0.8 | 5900.0 | -2.5 |
| pfu_aug2.0_10412.1_09768.t1 | 2 | 2 | Cadherin | 151 | 250 | 3.7e-12 | 46.3 | 1.7e-15 | 1.3e-11 | 44.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_10412.1_09768.t1 | gi|676461897|ref|XP_009056092.1| | hypothetical protein LOTGIDRAFT_232792 [Lottia gigantea] | 5.0e-39 |
| pfu_aug2.0_10412.1_09768.t1 | gi|572268609|ref|XP_006612344.1| | PREDICTED: protocadherin-15-like [Apis dorsata] | 5.0e-31 |
| pfu_aug2.0_10412.1_09768.t1 | gi|340725229|ref|XP_003400975.1| | 6.0e-31 | |
| pfu_aug2.0_10412.1_09768.t1 | gi|350403960|ref|XP_003486964.1| | 7.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_10412.1_09768.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10412.1_09768.t1 cttgtggatcgataggctctggagtcaccatatctgttgaagttactgaagctacaacattagatctatcagtcaacggc aatgccgacatttataaagccgataccggcatccaaggagttttaaacggaaatgatccaaatacgggaatctcgctcac catatcaaacagtgagggtacaccattcaatgtggttgtcactgatctgtttgagttgatcactgagcccttgtcctcac cgtcatttggattcaccaccagaacattccttcgattgaaatctgctgtcgacagagacggtacatcatcgacttctttg gatgatttggacgtaattgaatttacaatagagtgtaacagagtgggagtttccgattccgcccaattttacctgatgag ggttcaaattcgagatgtcaacgacaacacaccagttttcattaatgctccttatacaacaactatcagcgaggcaactc cagttggcaacaccattttcaccagtttgtccgccactgatttggattcaggagcaaacaaagaagtagattttgccatt gtaccaacaggtttagctaatgatgggtcctcattgttttcggttccagtagcaagaactggaacagtggtcgtgacaaa tccgttggactttgagtctgttacgtcatatatcctaaatgtatctgcaacagatcaagctgcagtagtatcagataggc gaacagtttataccactttgacagtaggagtgactgatgccgacgatctaccaccccagtttgttattccgaactgcatc acatcaaccaacaatcctttagtaccttcagcttgttttaatccaacgtacaggacgactctaacgtctggtgccgtaac ttcaggg |
|
Protein
| Protein ID | pfu_aug2.0_10412.1_09768.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_10412.1_09768.t1 CGSIGSGVTISVEVTEATTLDLSVNGNADIYKADTGIQGVLNGNDPNTGISLTISNSEGTPFNVVVTDLFELITEPLSSP SFGFTTRTFLRLKSAVDRDGTSSTSLDDLDVIEFTIECNRVGVSDSAQFYLMRVQIRDVNDNTPVFINAPYTTTISEATP VGNTIFTSLSATDLDSGANKEVDFAIVPTGLANDGSSLFSVPVARTGTVVVTNPLDFESVTSYILNVSATDQAAVVSDRR TVYTTLTVGVTDADDLPPQFVIPNCITSTNNPLVPSACFNPTYRTTLTSGAVTSG |
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